Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00990 ATCAACCCTGCTGACCCGTTGCAATTCCTTGTTCCTCTACATCTGGAGGCCTAGGGTCCTCCTAGGCTTGCCCTTCAACTATGGGTCCTTTCGAAGGAATCATTCAAGATGTTAAAGGAAGGATTGCATATTATAAACAAGATTGGGTTGTTTCAACATGCTCTTGTATCCGGATATTGGCTCCGACTTTCTACATATTCTTCGCTTCAGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAATAGGGATACAGGTGGAAGCTTAAGCACAGTAGAAACATTGGCATCAACTGCTATCTGTGGAATTATCCACTCAATACTTGGTGGTCAACCTTTGTTGATTGTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTATATGAGTTTTGCTTAAGAAGGCCAGAGTTGGGTGTTAAGATGTTTCTTCCTTGGGCTGGTTGGGTTTGTGTGTGGACAGCATTCTTATTAATTATGCTTGCAATTTTTAATGCCTGCAATGTTATCACAAGGTTCACGAGAGTTGCAGAGGAATTATTTGGCACGTTGATTACTGTCCTTTTCTTTCAAGAGGCTATAAAGGGACTTATAAGTGAGTTTGACACACCCAAGAATGCAAACCCTTTGTCAGAGGAAAATCAATTCCATTGGCGGTATACTAATGGACTACTTGCTATCATTTTCTCTTTAGGAGTACTTTTCACTGCCATGGCAAGGTGCCTACGAGGTTTTATTGCTGATTATGGGGTTCCATTGATGGTAGTAATTTGGACTGCACTATCTTATACTCTACCAGGCCAAGTTCCATCTGCTATTCCTAGAAGGCTGGTTTGCCCTTTGCCCTTTGAACGTGCCTCTCTCTACCATTGGACAATCGTAAAGGATATGGGGAAGGTACCTGTGGTTTATATTTGTGCAGCATCTATTCCAGCTTTGATGGTAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATTTAATCTTCAAAAACCATCTGCTTACCACTATGATATTTTCTTGCTTGCCATAATGACTCTAATTTGTGGTATCCTTGGACTTCCTCCATCAAATGGAGTCCTTCCACAGTCACCAATGCATACAAAAAGTTTGGCAGTTTTTAAGAGGCAGTTGATTCGTAAGAAGGTGGTAAAAAGTGCCAAGGAATGCATTAAGCTACAAGGAACCAACTCTGAAATACATGGAAAGATGCAAGCTGTATTTGTAGAAATGGATACAGCACGTACTGATAAAGAATTGGATAATTTAAAGGAGGCTGTGAAGAAATCTAATAAAAAGGATGGTGCAAAGAAAAATTTTGATTTTGATAAACAATTAGATGCCAATCTACCTGTCCGGGTTAATGAGCAAAGAATTAGTAACTTATTACAGATATTAGAAGGCTCTCATGCCTCATTTGTGGAGTCAGTACCATTCAAGACCATAGCAATATTCACAATCTTACAATTTGTGTATTTCCTAATTTGCTTTGGAATAACATGGATACCTATAGGAGGAATTCTTTTCCCATTACCTTTCTTCCTTCTCATCATTATAAGAGAGTATATCCTTCCAAAGGTATTCAAACCTGATCACCTTCAAGAGCTAGATGCTGCTGAATATGAGGAAATTGTTGGTGCTGCACATATGACACATATTATACCACCAAGGGAAAAAGATCCATGTGATCCTGTCAGGGAGGATGAGAGCTCGGAAGATTATTATGATGCAGAAATATTGGATGAGATGACAACTCACAGGGGAGAGTTGAAGCTCAGAACTGTAAGCCGAAATAATAGCACAAGCTTCAGCAGCAGCTTCAGCTACACTAGTGAAGATAGGCAATATTAG 1877 0.3964 MGPFEGIIQDVKGRIAYYKQDWVVSTCSCIRILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTVIMYTILYEFCLRRPELGVKMFLPWAGWVCVWTAFLLIMLAIFNACNVITRFTRVAEELFGTLITVLFFQEAIKGLISEFDTPKNANPLSEENQFHWRYTNGLLAIIFSLGVLFTAMARCLRGFIADYGVPLMVVIWTALSYTLPGQVPSAIPRRLVCPLPFERASLYHWTIVKDMGKVPVVYICAASIPALMVAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDIFLLAIMTLICGILGLPPSNGVLPQSPMHTKSLAVFKRQLIRKKVVKSAKECIKLQGTNSEIHGKMQAVFVEMDTARTDKELDNLKEAVKKSNKKDGAKKNFDFDKQLDANLPVRVNEQRISNLLQILEGSHASFVESVPFKTIAIFTILQFVYFLICFGITWIPIGGILFPLPFFLLIIIREYILPKVFKPDHLQELDAAEYEEIVGAAHMTHIIPPREKDPCDPVREDESSEDYYDAEILDEMTTHRGELKLRTVSRNNSTSFSSSFSYTSEDRQY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00990 598 PANTHER ANION EXCHANGE PROTEIN 451 527 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pste8g00990 598 Pfam HCO3- transporter family 3 178 IPR011531 GO:0006820|GO:0016020
Pste8g00990 598 Pfam HCO3- transporter family 214 359 IPR011531 GO:0006820|GO:0016020
Pste8g00990 598 Gene3D Helical hairpin bin 14 56 - -
Pste8g00990 598 Coils Coil 395 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00990 Pste-Chr8 5191184 5197751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00990 2 578 Antiporters AT5G25430 56.636 0.0 729
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00990 8 5191184 5197751 Pste8g00990 8 5191184 5197751 ECH
Pste2g01826 2 18639784 18642410 Pste8g00990 8 5191184 5197751 ECH
Pste8g00990 8 5191184 5197751 Pste2g01826 2 18639784 18642410 PCT