Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00975 GATTTTAACCAAAGTGACTAAACCAAAAGCTTCTTATAACAGCTGAATTGCTAATTTTGAAGGTTCATTGGTTCATGATTGTTCAAAAGTAGAAATGGATGAAAACAGGAAAGACACTAAGCCCCAAGTGAATAGTGGTATCAGTGAGAATCTGAAGAATCTGATCGATGGCTCCGATAAAAACTGGACCTACGTTATCTCGTGGGTGTTGGAGTGTTCCCCACCCACAGAGGGGTTCAAGTTCGAGAGCGGCTACTACAGAGGCAGAAAACAGGTGAAAGAGCTTCGCATTATGGGAGCCACAGTGAGCGTGACAGAAGAAGTAGAGAACCACGCTGAGAGCGAGTTCTTCTTTCAAATGTCCATGGGCATGTTCTTCGTCTTCTTCGACAAGGACTTGCCGGAAGAAGCTTTCCGGAACTTGGGTCCGCTGTGGGTCAACGCCACTAATATGAGCACTTCGAGTTCGAGGTTTGGGGAGAGGCACCTGTGGGGGACGTGGGAGAGGACCAGGTGGGGTCACTGTTTTGGGATTCAAACATTTCTTTGCATTCCATTGCAGAATGAAAGAGTGCTGGAATTTGCCTCCACTGAAGTCATACTCTACGACCCTCAATGGATACAATATATGGCCGATTTCATTTTTCCAATTGGGACACCTCGCTGCCTCAATTTCCGGAAAAAGGAAAGGTTGCCTGTAAGAGCAGATAGTGGGACACAGAATCATGAGAGTGGAAATTTATCTAAGCAATCCCGAGGCAAGGAGAAGATAAGTAATTCAAACTGTTCATGGTCCTTATTAACAGAAAGTTCCTTATTGTCAGAAAGTTCTGATGAAACATTTTACTCCGGACCCTCTTTAACTTCTAACACGACCCTTTTTAATCCAGTTTTAATATTTGGTTTTGAATCTTTTGATGTTACCCTTAACACCACCATATATATTTATTTTTTGTCCCCGCATCAACAGTTAGTCCGCGTAGGAACTTTTCTATCATTAAAGAAAATGCAAATGACAAGCCTTTTTGCATATAAACAGAGACTGGTCAAAGAAGAAAAACGTGTGGATGGAATAATTACCAAAACATTGCATCTACACCATCTATTTGATCCAAGACATCATTTAAACTCTCTTATCTCACCGGACAACAAGAAATTAACAACATTATGTTATATAATCAAAGAAAAGAAAGCACACACCTCAATTTCTTCCGTTATGGAGACATGCATGACGTCCTCCCTGTGGCTGGCAACGCCGCAATCCGAAACCAGCAGAACTCCACCTCCGCCGGCGCCGCCGTGGCAATCTCAGTCTCCGCTCCAGAAACGGTTGCAAACGCTACTCGACGGCGCCAGAGAGAGCTGGACCTACGCGATTTTCTGGGAATCGGCGCACGACAACTTCTCCGGCGGTTCGCTTCTCCGGTGGGGAGACGGTTATTACCGAGGCGGGGAAGAGGAAAAAGGAGAAGCGAAAACGACGTCGTGGTTGGAAGAACAGGCACGGCGGAAGAAGGTTCTTCTGGAATTGAATACCCTAATTGCGGGGCCCGAGGTGTGCCCTGATGACGTGGAGGAAGAGGCTTTTTTTAATAGCATCCCCGTTTGGGTCACTGGGCCCGATCGGTTGTCTGAGTTGGGCTGCCAACGGGCCCGGCAGGGGCAGGTCTATGGGCTTCGGACTCTGGTTTGCATACCGTGCGGAAACGGCGTCGTTGAGGTCGCCTCCACCGAGGTGATTTTCGAGAACCCTCATCTGATGAATAAAGTGGTCGCCTTGTTCAACTTCTCCAACCCACACGCCCTGCACACCCATCACCTTCTAACACGGAAAGATAAAAAGTTTCGTGAAAAAACAAGTACTGAGATGCAGAATTGTGAGAACAACTTATCTAAGCAATCTAGAGGCAAGAAGAAGATGAGTGATGATTCAAAATGCTGCTCGTGGCCTTTGTTATCAGCAAGTTCTGACGGAGGCAGTGATAGCACATTTTCAAATTCAGATGACTATTCTGGTCCCTCTTGAATTTATCATGATAATTTCCATAGATGAAATTTGATTTTAAACTTATATACCTGCGATAGCTGAAATTATCATTATCGTTGAGGAAGCATAGAATTTGTTTGCTATGGTTGGAATGTGAAGTATTAACAACATTCCATCAAAAGAAATGAAAATTTTGTTGACATTTCTTCTTGTAAATAATGGTAGAGCTAAAAGAAAAGCTTTTAGTTGATTTGTAAAAGCCATGCTTATGAAATAGAAATATCTCTTCTCTTGATTCCTGACAAGAAACTTAGCATAGTAGTAGCAGGAGGAAGAATTGGTTCACACTTTTATGATTAGACCCCACCCGAATGAAAAACTTATCTCCTCCCCTTTTGTGACTGGATATCTTTTACATAACTTTATCTATATTTTTGGTTTGT 2430 0.4358 MDENRKDTKPQVNSGISENLKNLIDGSDKNWTYVISWVLECSPPTEGFKFESGYYRGRKQVKELRIMGATVSVTEEVENHAESEFFFQMSMGMFFVFFDKDLPEEAFRNLGPLWVNATNMSTSSSRFGERHLWGTWERTRWGHCFGIQTFLCIPLQNERVLEFASTEVILYDPQWIQYMADFIFPIGTPRCLNFRKKERLPVRADSGTQNHESGNLSKQSRGKEKISNSNCSWSLLTESSLLSESSDETFYSGPSLTSNTTLFNPVLIFGFESFDVTLNTTIYIYFLSPHQQLVRVGTFLSLKKMQMTSLFAYKQRLVKEEKRVDGIITKTLHLHHLFDPRHHLNSLISPDNKKLTTLCYIIKEKKAHTSISSVMETCMTSSLWLATPQSETSRTPPPPAPPWQSQSPLQKRLQTLLDGARESWTYAIFWESAHDNFSGGSLLRWGDGYYRGGEEEKGEAKTTSWLEEQARRKKVLLELNTLIAGPEVCPDDVEEEAFFNSIPVWVTGPDRLSELGCQRARQGQVYGLRTLVCIPCGNGVVEVASTEVIFENPHLMNKVVALFNFSNPHALHTHHLLTRKDKKFREKTSTEMQNCENNLSKQSRGKKKMSDDSKCCSWPLLSASSDGGSDSTFSNSDDYSGPS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00975 643 MobiDBLite consensus disorder prediction 590 643 - -
Pste8g00975 643 PANTHER MYC 14 185 IPR045084 GO:0003700|GO:0006355
Pste8g00975 643 MobiDBLite consensus disorder prediction 617 643 - -
Pste8g00975 643 MobiDBLite consensus disorder prediction 203 223 - -
Pste8g00975 643 MobiDBLite consensus disorder prediction 387 409 - -
Pste8g00975 643 MobiDBLite consensus disorder prediction 206 223 - -
Pste8g00975 643 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 179 IPR025610 -
Pste8g00975 643 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 496 563 IPR025610 -
Pste8g00975 643 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 409 494 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00975 Pste-Chr8 5097973 5105476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00975 399 565 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 44.949 1.81e-41 157