Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00968 ATCATTATTATCTCTCTCTCTGGAAAGGACGCAAAGCACCACGGTATCAGTCAAAAAAGCTGTTTAGCTTCAGGGGCACCACCAAAGGCCAAAACACAGCACCTCAAGGAAAACGAATATCCTCTTTGATCCCTTTATTATATTCTTATTTTATAAACTTAAACATCTCTCTATCATATCTTAAAAGTTAAAACAAACAAATACTTCAAACTTTGATATGCAAGTGGCGGCAGAACTCCAACACACTCACACCCATCACCACCAAGACACCCCCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCCTCTCTCACTCCGCCGTAGACGCTGTCTCCGACCAGCTCGACGGCGAGGATCTCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCAGAACCTGCTAACTTCGCCTTCCTCCAAACCCTCGGCCTCCGTTCCATCATATATTTGTGTCCCGAGCCGTATCCAGAGGCCAACTTGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCAGTTTGGGATTGAGGGTCATAAGGAGCCTTTTGTGAACATCCCAGATGACACAATCCGTGAAGCACTAAAAGTTGTCCTTGGTTGTTTGGTAGGATGCTATAGAAAATTGCAAAAGTGGTGCTTGTCATCTGTCTTTGATGAGTACCAGCGCTTTGCGGCTGCCAAAGCTAGAGTCTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCGAGCCTGAAACATTTGCCCATACCGTTTTCATGTTTGAAGAGGTAA 805 0.4559 MQVAAELQHTHTHHHQDTPMCRQIQLTISDHTLSHSAVDAVSDQLDGEDLFIPPLNFAMVDNGIFRSGFPEPANFAFLQTLGLRSIIYLCPEPYPEANLEFLKSNGIKLYQFGIEGHKEPFVNIPDDTIREALKVVLGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPFSCLKR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00968 195 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 180 IPR029021 -
Pste8g00968 195 Pfam Tyrosine phosphatase family 52 137 IPR004861 -
Pste8g00968 195 CDD PFA-DSP_Siw14 50 179 - -
Pste8g00968 195 Gene3D Protein tyrosine phosphatase superfamily 50 182 IPR029021 -
Pste8g00968 195 PRINTS Plant and fungal dual specificity phosphatase signature 51 68 IPR020428 GO:0016791
Pste8g00968 195 PRINTS Plant and fungal dual specificity phosphatase signature 88 101 IPR020428 GO:0016791
Pste8g00968 195 PRINTS Plant and fungal dual specificity phosphatase signature 107 121 IPR020428 GO:0016791
Pste8g00968 195 PRINTS Plant and fungal dual specificity phosphatase signature 124 138 IPR020428 GO:0016791
Pste8g00968 195 PANTHER TYROSINE-PROTEIN PHOSPHATASE 38 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00968 Pste-Chr8 5041137 5044616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00968 31 195 Protein tyrosine phosphatase (PTP) family AT4G03960 65.027 5.46e-84 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00968 8 5041137 5044616 Pste8g00968 8 5041137 5044616 ECH