Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00945 AGGAAACTGTGAAACAAGTTAACCCGCTCGACCCTTGAGTCTCTCTCTCGCAATCGCTTCACACACAAACACACACTCACTCTATTCTCTCTATATCTCTCCGACCTGGCGAGACCGAGCGATTCGACCCTAATCTCGCGATGCTCCGCCGCGCAACCTCCGCCCTCCTCTCCGGCGCCTCCCGTCGCCGCTTCTCCACCGACGTGGCGGCGCCTTCCGCCGCCGAGTCCACCTTCGCTGAAGCGTGGAAGAAAGTGAGCCCCAACATTGACCCTCCCAAAACGCCGTTGGCTTACATGAAGCCCCGTCCCCCCACTCCGTCAACTCTCCCCACCAAACTCACCGTCAACTTCGTTTTGCCCTACGCTTCCCAATTGTCCGCAAAAGAGGTTGATATGGTCATTGTACCAGCAACAACTGGGCAGATGGGTGTTCTCCCAGGACATGTTGCAACAATTGCAGAGTTGAAACCTGGTGTCCTATCTGTGCATGAAGGGAACGATGTGACCAAGTTCTTTGTTAGCAGTGGCTTTGCATTCATACATGCAAACTCTGTTGCTGATATAGTAGCTGTTGAGGCTGTGCCAGTAGATCGAATTGATGCCAATCTAGTGCAGAAGGGTCTTCAAGAGTTCACCCAGAAACTGAACTCAGCTACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGATGTCCATAGCGCTCTCAACTCTGCTCTCACAGGCTAATAAGTACCGTAGTGTTGAGACTTTCCTTTTGTATTTGTTTGTTTTCCCCCCCTACTGCGTGGCATTGATTTGTCTCGGTGTAATCAAAGTTGCTAAAGAACATTATCATCATGAATTCGTGTGCATGAGTTTTTTATGAATATAAAGAATGTTAAGGATAAAAGTCGAGCCACACGAGAGGTGGAAGCATGAGTCTGCTTGAAGTGTAATATTTATTCATTCCAGTCCTATGATATAAAATGCAAATCTTTGTAGTTTATATGCTTTCATTTAGATTATACAGGTTAGTTTTTCAAAAACCTTATAACTATATTTTCCTAAAATATCTTTAAAAAATTAAATAGCTTTTTCTTTATGAAAGAAAACCGTAAATATA 1110 0.4514 MLRRATSALLSGASRRRFSTDVAAPSAAESTFAEAWKKVSPNIDPPKTPLAYMKPRPPTPSTLPTKLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKFFVSSGFAFIHANSVADIVAVEAVPVDRIDANLVQKGLQEFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00945 197 FunFam ATP synthase delta 56 153 - -
Pste8g00945 197 Coils Coil 162 182 - -
Pste8g00945 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 25 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pste8g00945 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pste8g00945 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Pste8g00945 197 NCBIfam ATP synthase F1 subunit epsilon 72 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pste8g00945 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pste8g00945 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Pste8g00945 197 Gene3D - 154 196 - -
Pste8g00945 197 Gene3D - 57 153 IPR036771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00945 Pste-Chr8 4919377 4921395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00945 1 197 Primary Pumps ATPases AT5G47030 71.717 2.00e-103 295