Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00935 ATTCTGTATTCAGTCTTAAGCCTCGATTCATTGCAACTTTTCACGTTTGCTGAAAACCAAGAGAGGGAAGCAAGCAGTCTTCTAGAGTGGAAAGTTAGCCTTGACAACCTCAGCCAGGCTTCTCTGTCTTCATGGTCCAGTCGTGTCAGTCCTTGCAAGTGGAAAGGAATCCGTTGTGACAAATCCAACTCTTTGACCACTATAAATCTTTCTAATTTTGGCCTTCAAGGTACTCTCCATAATCTCAACTTCTCCTCCTTTCCCAACCTTCACACTCTGAATATTAGTAACAACAGTTTTCGTGGAACTATTCCTCACCAAATTGCTAACTTGTCCATAATTTCCACGTTGATAATGGAGAATAATATTTTTACTGGTTCCATCCCTATTTCCATTATGAACTTGTCTAGTTTGTCATTGCTAAACTTAGCATGCAACAAACTTTCTGGCTACATTCCTATGGATATTGGACAACTTAGGAGCTTGAAGCGTCTATTACTTGGATCAAATGTCCTTTCTGGTCCCATTCCTCCAACAATTCGAATGTTGTCCAACCTCGTTGAACTTAATCTCTCAACTAACTCTATCTCTGGTACAATCCCTTCAATTATAAATTTGACAAATTTAGAAACCCTTCGCCTCTCAGAAAATAATCTTTCTGGCCCCATTCCACCCTATATAGGAGAATTGGTCAATTTGATTGATCTTGAAATTGATATCAATAGACTTTCAGGCTCCATTCCTCCGGGTATTGGAAACTTGACAAAGCTGTTCTATCTTTCCATGGGTCTTAACGACATTTCTGGATCAATTCCTACCTCCTTCGGAAACTTGGTCAATCTAAAGTTCTTTGAGCTTTCTGAGACCAATATTTCCGGATTTATTCCTTCCACCATTGGAAATTTGACAAAGCTTGCCTATTTAGTTTTGTTGGAAAACAAACTTGAAGGTACACTACCATCAGCTATGAATAATTTTACCAATTTACAGTCCTTACAGTTATCTTCAAATCGTTTCAATGGCCCTTTGCTACAACAAATTTGCGTTGGTGGAGCACTTTTCAAATTTTCTGTCGAGGATAATTATTTCACCGGTCCAGTCCCGAAAAGCCTGAAAAATTGCTCCAGTCTTTTTAGACTCAGACTAAATAGAAACCAGTTGACCGGAAATATATCAGAAGATTTTGGTGTATATCCTAAGTTGAACTACGTTGATCTAAGTAGCAATAATTTTTATGGCCACATTTCACCAAACTGGGCAAAGTGTCCTGCTCTCACAAGCCTTATGATCTCCAACAACAATCTATCCGGTGCTTTACCACTTGAGCTCGGCCAGGCACCCTCGTTAGAAAGACTTGTCTTGTCTTCAAATCATCTAACGGGGAAAATTCCCAAACAATTTGGGAACTTGACCTCTTTGTTGGAGCTATCAATAGGCCACAATGAACTTTCTGGAACCATTCCTACAGAGATAGGGGCTTTGTCCGACCTTACAAAACTGGAGCTAGAAGCAAATAATTTAGGTGGCTCAATTCCGAAACAGGTGGGAGATTTACACAAATTAATTAACTTGAATTTGAGCAAGAACAGGTTCACAGAAAGCATTCCTTGGGAATTTAACCAACTCCATTCTCTTGAAGATCTTGATCTTAGTTGCAATTTGTTAAATGGAGAAATACCAGTGGCACTCGCAAGTTTGCAAAAATTAGAAACGCTAAACCTCTCACACAACAACCTCTCTGGAACCATTCCATCTAAATTTAAGGATACGTTGAGCTTGTCAAATGTTGACGTATCTAACAACCAACTGGAGGGTTCAATTCCGAACAATCGAGCCTTTCTTAATGCTTCATTTGATGCACTGAAAAATAATAAAGGCTTGTGTGGGAACGCCTCTGGTCTGGTGCATTGCCCTGAATTGAGTCACAATCCTCATGGTAAAGTGAAAAGAAATGTTATCAAGTTGGCATTAGTCCTTACTCTGGGTGCTCTATTTCTAGTTGTATTTTTTATTGGAGTTTCATTATGTATCTGCCATCGAAAAGCAACCAAAACCAAAAAACGGGAGGCTGAAGAAGAAAAAAGTCAGTATCATTATTCTGTATGGAGTTATGATGGAAAATTAGTGTATGAAAATATAATTGAAGCAACAGAGGGGTTTGATGATAAATATCTCATTGGAGAAGGAGGGTCTGCATCTGTTTATAAGGCAAAATTGCCCACAGGGCAAGTTGTTGCTGTGAAAAAACTTCATGCTGCACCGAACGAGGAAACACTTGATTTAAGAGCATTTACAACCGAGGTTAAAGCCTTGGCAGAAATCAAGCATCGTAATATTGTGAAGTCACTTGGATATTGTTTACATCCACGTTTCTCCTTTTTGGTTTATGAATTCCTAGAGGGGGGTAGCTTGGATAAAGTACTTAACGATGATACGCGTGCAACAATGTTTGATTGGAACAGGAGGGTGAAAGTTATTAAAGGTGTGGCAAGTGCTTTGTATCATATGCATCATGGTTGTTCTCCTCCTATTGTTCATCGGGACATATCAAGCAAGAATGTTCTCATAGATTCAGATTATGAAGCCCACATCTCTGACTTTGGAACAGCTAAAATTCTGAATCCCGATTCACGCAATTTAACCTCCTTTGCAGGCACCTATGGCTATGCTGCACCAGAGCTTGCTTATACAATGGAAGTGAATGAGAAATGTGATGTGTTCAGTTTTGGAGTGCTTTGTTTGGAACTAATGATGGGAAAGCATCCAGGAGATCTCATTTCTTCGTTATTTTCATCCTCTGGAACATCATCAGCGTCTAATTTGTTATTAAAGGATGTGTTGGACCAACGACTACCTCATCTTGAGAAGCCAGTTGTTCAGGATGTGATCTTGATTGCAAAAATAACATTTGCTTGCTTAAGTGAAAATCAACGCTTTCGCCCAAGCATGGAGCAGGTGCATAACGACTTTGTGATGCCAAAATCATATTCAATGGATCCACTCTCTATGATCACACTTGCTCAACTAGTAAACAGTTGAACTATTGAACCTTGTTTTCTAATTTGTTGTATGCCTTTTTGTTTTCTTTTGTGTGTACCGTAAGCATTTCTTCATATTAATGTTTCTCTTGTTCGTGTTTTACATGTTTTAGGATCCAGTGTTTTCTATGTCTCTTCTGCTTTGAAAAACCAGGCAAGTATTGGAAGTTTTCTCATTTCTTTTTGTAAGATCGGATAAATACAGTGCGATTTTAAA 3255 0.388 ILYSVLSLDSLQLFTFAENQEREASSLLEWKVSLDNLSQASLSSWSSRVSPCKWKGIRCDKSNSLTTINLSNFGLQGTLHNLNFSSFPNLHTLNISNNSFRGTIPHQIANLSIISTLIMENNIFTGSIPISIMNLSSLSLLNLACNKLSGYIPMDIGQLRSLKRLLLGSNVLSGPIPPTIRMLSNLVELNLSTNSISGTIPSIINLTNLETLRLSENNLSGPIPPYIGELVNLIDLEIDINRLSGSIPPGIGNLTKLFYLSMGLNDISGSIPTSFGNLVNLKFFELSETNISGFIPSTIGNLTKLAYLVLLENKLEGTLPSAMNNFTNLQSLQLSSNRFNGPLLQQICVGGALFKFSVEDNYFTGPVPKSLKNCSSLFRLRLNRNQLTGNISEDFGVYPKLNYVDLSSNNFYGHISPNWAKCPALTSLMISNNNLSGALPLELGQAPSLERLVLSSNHLTGKIPKQFGNLTSLLELSIGHNELSGTIPTEIGALSDLTKLELEANNLGGSIPKQVGDLHKLINLNLSKNRFTESIPWEFNQLHSLEDLDLSCNLLNGEIPVALASLQKLETLNLSHNNLSGTIPSKFKDTLSLSNVDVSNNQLEGSIPNNRAFLNASFDALKNNKGLCGNASGLVHCPELSHNPHGKVKRNVIKLALVLTLGALFLVVFFIGVSLCICHRKATKTKKREAEEEKSQYHYSVWSYDGKLVYENIIEATEGFDDKYLIGEGGSASVYKAKLPTGQVVAVKKLHAAPNEETLDLRAFTTEVKALAEIKHRNIVKSLGYCLHPRFSFLVYEFLEGGSLDKVLNDDTRATMFDWNRRVKVIKGVASALYHMHHGCSPPIVHRDISSKNVLIDSDYEAHISDFGTAKILNPDSRNLTSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLELMMGKHPGDLISSLFSSSGTSSASNLLLKDVLDQRLPHLEKPVVQDVILIAKITFACLSENQRFRPSMEQVHNDFVMPKSYSMDPLSMITLAQLVNS 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00935 1012 Pfam Leucine rich repeat 521 579 IPR001611 GO:0005515
Pste8g00935 1012 Pfam Leucine rich repeat 447 507 IPR001611 GO:0005515
Pste8g00935 1012 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Pste8g00935 1012 Pfam Protein kinase domain 722 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00935 1012 Gene3D Ribonuclease Inhibitor 19 176 IPR032675 -
Pste8g00935 1012 SMART LRR_typ_2 206 230 IPR003591 -
Pste8g00935 1012 SMART LRR_typ_2 470 494 IPR003591 -
Pste8g00935 1012 SMART LRR_typ_2 566 589 IPR003591 -
Pste8g00935 1012 SMART LRR_typ_2 135 159 IPR003591 -
Pste8g00935 1012 SMART LRR_typ_2 518 541 IPR003591 -
Pste8g00935 1012 SMART LRR_typ_2 542 565 IPR003591 -
Pste8g00935 1012 SMART LRR_typ_2 87 111 IPR003591 -
Pste8g00935 1012 ProSitePatterns Protein kinases ATP-binding region signature. 726 749 IPR017441 GO:0005524
Pste8g00935 1012 Gene3D Phosphorylase Kinase; domain 1 679 798 - -
Pste8g00935 1012 ProSiteProfiles Protein kinase domain profile. 720 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00935 1012 FunFam Nuclear pore complex protein NUP107 20 177 - -
Pste8g00935 1012 ProSitePatterns Tyrosine protein kinases specific active-site signature. 844 856 IPR008266 GO:0004672|GO:0006468
Pste8g00935 1012 Gene3D Ribonuclease Inhibitor 349 645 IPR032675 -
Pste8g00935 1012 SUPERFAMILY Protein kinase-like (PK-like) 698 990 IPR011009 -
Pste8g00935 1012 SUPERFAMILY RNI-like 294 609 - -
Pste8g00935 1012 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Pste8g00935 1012 FunFam Leucine-rich repeat receptor protein kinase MSP1 682 798 - -
Pste8g00935 1012 FunFam MDIS1-interacting receptor like kinase 2 799 996 - -
Pste8g00935 1012 Gene3D Ribonuclease Inhibitor 285 348 IPR032675 -
Pste8g00935 1012 FunFam Leucine-rich repeat receptor protein kinase EMS1 178 274 - -
Pste8g00935 1012 PANTHER LEUCINE RICH REPEAT KINASE 2 275 995 - -
Pste8g00935 1012 Gene3D Ribonuclease Inhibitor 177 274 IPR032675 -
Pste8g00935 1012 ProSiteProfiles Leucine-rich repeat profile. 568 590 IPR001611 GO:0005515
Pste8g00935 1012 SUPERFAMILY L domain-like 29 341 - -
Pste8g00935 1012 Gene3D Transferase(Phosphotransferase) domain 1 799 998 - -
Pste8g00935 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 326 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00935 Pste-Chr8 4864142 4867502 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00935 22 892 Receptor kinase-like Gene Family AT4G08850 44.224 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste8g00935 Pkinase 8e-44 CL0016