Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00931 TTTTAAGGCTCTCTTCCTTGGAAAGTTCTGGCATTTCTTTTGCCAATTCTACTGTAATGGTTGACTATGAAGCAAGTGCTCTATTGAAGTGGAAAGCCAGCCTTGATAACCAAAGTCAGGATTCCTTGTCTTCTTGGTCCACTTTTACTAGTCCTTGCAAGTGGAAAGGAATTGTTTGTGATGAATCCAACTCAATCAACACTATAAATGTTGCAAAATTTGGACTAAAAGGTACACTTCTCAATCTAAACTTCTCATCCTTTCCTAAGCTGCTCAGTTTGGATATAAGTCGCAACTTCTTCAGTGGATTTATTCCCCCCCAAATTGGCAACCTGTCCAGAATTTCTAAGTTGAAAATGAGTCATAATCCTTTTAGTGGTTTCATCCCCAAAGAAATAGGTCAATTGCATAACTTGAAGTATCTGTGCTTGAGATTAAATGAACTTCGTGGTTCCATTCCTCCAACAATTGGTATGTTGACAAATCTTGTTATTCTTGATTTGTCATCCAACCATCTCTCTGGTGCAATCCCTTCAATTAGAAACTTAACAAATTTAAAACAACTTATCCTGTTTAACAACCTTCTCTCTGGCCCTATTCCTGAGGAATTGGGTGGACTTCCTTTTCTCGAAAATGTCAAATTGCTAAAAAATAATTTCTCTGGGCCAATCCCATCTTCCATTGGAGACTTGGCTAATTTGAGAACTCTTCAGATCACTCGTAATAAACTTGATGGATCAATTCCTCCCACTCTTGGAAACTTGACAAAACTCACTGAATTGTCCATAAACAATCTTTCAGGACCTATTCCCTCTACTTTCAGAAATTTGACAAGGCTCACCTATCTATTACTTTATGAGAACTGCCTTGATGGTAGTATTTCTACGGTAATAAGTAACCTTACCAATTTAGCAACCTTACAACTAAGCTCGAATCATTTCACTGGCCCTTTGCCGCAACATATTTTCCTTGGAAGGTCACTTGTAAATTTTTCTGCCAATGACAATCATTTGGAAGGTTCAATTCCAACAAGTTTGAAAAACTGCTCCAGCCTTGTTAGGCTCAACCTTGCAGAAAATAAGTTGACTGGAAATATTTCAATTGATTTTGGTGTATATCCAAAATTGACCTACATTGATCTCAGTAGCAATGACTTCTATGGCCACCTTTTGTCAAATTGGGCTAAATGCTACAATCTCCTAGGCCTAATAATCTCAGACAACAATTTATCCGGTGGTATACCGCCGGAGTTAGGCCAGGCACCTAAATTACAAAAGCTTGAACTGTGTTCAAATCATCTAACAGGAAAAATTCCAAGGGAACTTGGGAACTTGACTTCCTTGTCTCTACTCTTGATAAGTAAGAACAAACTTTCAGGCAACATTCCTATGGAAATAGGATCCTTAAAGCGACTTCAGCGCTTGAATCTTGCAACAAACGATTTAAGTGGCTCAATCCCAAAACAGCTCGGAGGATTGCTCAATTTAATTCACTTGAACTTAAGCCATAACAAATTCGTGGAAAGCATTCCCTCTGAATTTAACCAACTGCAATCTCTTGAAACTCTTGATTTTAGTGGGAACTCTTTAAATAGTAAAATTCCATCAGCACTTGGAAATTTGAAGAAGTTGGAAACATTGAACCTCTCGCAAAATAATCTCAGCGGAAGCATTCCATCTAACTTTAAGGATATGCTGAGCTTGACAAAGGTTGATATATTTAATAACCAGTTAGAAGGTGAAATTCCTAACAATCCAGCCTTCCTTGAGGCTCCATTTGAAGCATTAAGAAATAATAAAGGCTTGTGTGGTAATGCTTCTGGCTTGGTGCCTTGTCCACAGACACAGTTGAATCCCCGTTCTAAGGGTAAAAGGAGAAAGGTTACGATTTTTATTTTGGGTTCATTATTTCTAATAATGTTTGTGAGTGGAGTTTCATTACATATTCATTGGCAAAGAGCAAGAAAAATAAAAAACCAGGACAGAGAAGAACAAACCGAAGATCTTTTTTCCATATGGAATTATGATGGAAAAATAGTGTATGAAAGCATCATCGAAGCAACAAATGATTTTGATGACAAATATCTCATTGGAGAAGGAGGGTTTGGATGTGTTTACAAGGCTGTCTTACCCTCTGGTCAGATTGTTGCTGTTAAAAAACTTCAGGCTGAAGTTGACAGGGAAATGCTTAACTTTAAGGCTTTTACATCCGAAGTTCGAGCCTTGACACAAATCAAACATCGCAACATTGTTAAGTTTTATGGATTTTGTGCACATCCACGCAATTGGTTTTTGGTTTATGAGTTCCTAGAAGGTGGCAGCTTGAATAAAGTGGTCAGGAACGACACAGAAGCAGTAATGTTTGATTGGAATAGGAGGGTTAGCGTTGTTAAAGGTGTGGCAAGTGCTTTGTATCACATGCATCATGGTTGCTCTCCTCCTATTCTTCATCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGAATATGAAGCTCGCATCTCTGACTTCGGAACAGCAAAGATTCTAAATCCTAATTCGCGCAATTTAACTTCATTTGCAGGCACTTACGGATATGCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAATGCGATGTCTTCAGTTTTGGGGTCCTTTGTTTGGAAATATTAATGGGAAATCATCCTGGAGATCTCATTTCTTCAATGTATTCACCCTCTTCAGCACCATTGACATCTAATTTGTTATTGAAGGATGTGCTGGACCAACGACTTCCTCTTCCAATAATGCCAGTGGTTAAGCAGGTGGTCTTGATTGCAAAAGTGGCATTTGCTTGTTTGAATGAAAGACCACTTTCTCGCCCAACCATGGAAGATGTGTACAACATGTTTGTCATACCCAAATCACCTTTAAGAAATGAGACATTAAACACCATTGCATTTGGACAACTTCAAAATTATTGAACTTGGTTTTCTTTTGTACTATTGAGTTTATGT 2987 0.3806 MVDYEASALLKWKASLDNQSQDSLSSWSTFTSPCKWKGIVCDESNSINTINVAKFGLKGTLLNLNFSSFPKLLSLDISRNFFSGFIPPQIGNLSRISKLKMSHNPFSGFIPKEIGQLHNLKYLCLRLNELRGSIPPTIGMLTNLVILDLSSNHLSGAIPSIRNLTNLKQLILFNNLLSGPIPEELGGLPFLENVKLLKNNFSGPIPSSIGDLANLRTLQITRNKLDGSIPPTLGNLTKLTELSINNLSGPIPSTFRNLTRLTYLLLYENCLDGSISTVISNLTNLATLQLSSNHFTGPLPQHIFLGRSLVNFSANDNHLEGSIPTSLKNCSSLVRLNLAENKLTGNISIDFGVYPKLTYIDLSSNDFYGHLLSNWAKCYNLLGLIISDNNLSGGIPPELGQAPKLQKLELCSNHLTGKIPRELGNLTSLSLLLISKNKLSGNIPMEIGSLKRLQRLNLATNDLSGSIPKQLGGLLNLIHLNLSHNKFVESIPSEFNQLQSLETLDFSGNSLNSKIPSALGNLKKLETLNLSQNNLSGSIPSNFKDMLSLTKVDIFNNQLEGEIPNNPAFLEAPFEALRNNKGLCGNASGLVPCPQTQLNPRSKGKRRKVTIFILGSLFLIMFVSGVSLHIHWQRARKIKNQDREEQTEDLFSIWNYDGKIVYESIIEATNDFDDKYLIGEGGFGCVYKAVLPSGQIVAVKKLQAEVDREMLNFKAFTSEVRALTQIKHRNIVKFYGFCAHPRNWFLVYEFLEGGSLNKVVRNDTEAVMFDWNRRVSVVKGVASALYHMHHGCSPPILHRDISSKNVLIDLEYEARISDFGTAKILNPNSRNLTSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLEILMGNHPGDLISSMYSPSSAPLTSNLLLKDVLDQRLPLPIMPVVKQVVLIAKVAFACLNERPLSRPTMEDVYNMFVIPKSPLRNETLNTIAFGQLQNY 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00931 965 SUPERFAMILY Protein kinase-like (PK-like) 655 942 IPR011009 -
Pste8g00931 965 ProSiteProfiles Leucine-rich repeat profile. 143 165 IPR001611 GO:0005515
Pste8g00931 965 Gene3D Ribonuclease Inhibitor 2 158 IPR032675 -
Pste8g00931 965 ProSitePatterns Tyrosine protein kinases specific active-site signature. 796 808 IPR008266 GO:0004672|GO:0006468
Pste8g00931 965 Pfam Leucine Rich Repeat 524 544 IPR001611 GO:0005515
Pste8g00931 965 ProSitePatterns Protein kinases ATP-binding region signature. 678 701 IPR017441 GO:0005524
Pste8g00931 965 PANTHER LEUCINE RICH REPEAT KINASE 2 241 947 - -
Pste8g00931 965 SMART LRR_typ_2 69 93 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 141 163 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 474 497 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 498 521 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 164 188 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 522 545 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 212 236 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 450 473 IPR003591 -
Pste8g00931 965 SMART LRR_typ_2 282 306 IPR003591 -
Pste8g00931 965 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 160 245 - -
Pste8g00931 965 Gene3D Ribonuclease Inhibitor 159 241 IPR032675 -
Pste8g00931 965 Gene3D Phosphorylase Kinase; domain 1 632 750 - -
Pste8g00931 965 FunFam MDIS1-interacting receptor like kinase 2 751 948 - -
Pste8g00931 965 ProSiteProfiles Protein kinase domain profile. 672 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00931 965 Gene3D Transferase(Phosphotransferase) domain 1 751 951 - -
Pste8g00931 965 Pfam Leucine rich repeat 452 511 IPR001611 GO:0005515
Pste8g00931 965 SMART LRR_sd22_2 498 530 - -
Pste8g00931 965 SMART LRR_sd22_2 258 284 - -
Pste8g00931 965 SMART LRR_sd22_2 141 166 - -
Pste8g00931 965 Pfam Protein kinase domain 674 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00931 965 SUPERFAMILY RNI-like 242 563 - -
Pste8g00931 965 Pfam Leucine rich repeat N-terminal domain 3 42 IPR013210 -
Pste8g00931 965 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 282 597 - -
Pste8g00931 965 Gene3D Ribonuclease Inhibitor 242 303 IPR032675 -
Pste8g00931 965 Gene3D Ribonuclease Inhibitor 304 600 IPR032675 -
Pste8g00931 965 FunFam Leucine-rich repeat receptor protein kinase MSP1 635 750 - -
Pste8g00931 965 ProSiteProfiles Leucine-rich repeat profile. 476 498 IPR001611 GO:0005515
Pste8g00931 965 PRINTS Leucine-rich repeat signature 144 157 - -
Pste8g00931 965 PRINTS Leucine-rich repeat signature 522 535 - -
Pste8g00931 965 FunFam Nuclear pore complex protein NUP107 2 159 - -
Pste8g00931 965 SUPERFAMILY L domain-like 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00931 Pste-Chr8 4848779 4851950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00931 5 844 Receptor kinase-like Gene Family AT4G08850 43.646 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste8g00931 Pkinase 1.1e-46 CL0016