Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00928 GTCACATTTCCCAAACTACCCTTCCCTCTCTCTCCCTCCCTCCCCCTCCCTCCAACTATAACTAGTCTCTCTCCATGCTCCTGTAGTAGCAGTGACTGCAACAACGCATTCTTTCTTTGTCCTCCGCACACAATGCGAATTGCGAAGGAACATCACAACACAACACAACACAACCATTGAATTGATCCATTCGTCACTCATACGAGAGACACCACTCTTTTTCTTTGGCTCTCAGTTAAGGTGATGGTGGAAGCAGGTGAAGACTGTTGCGTGAAGGTCGCGGTCCACGTGCGACCCCTCATCGGTGAGGAGAAGGTACAGGGATGCAAGGATTGCGTGACTGTCGTGCAGGGGAAGCCTCAGGTACAAATTGGTACACATTCCTTTACATTTGATCATGTTTATGGGAGCACTGGTTCTCCCTCATCTGTCATGTTCAATGAATGTGTTGCATCCCTTGTTGAAGGCTTGTTCCATGGATACAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCCGGGAAAACATACACCATGGGCACTGGCTTTAAAGATGGTTTCCAAGAGGGAATAATACCCCAAGTTATGAGTTCCTTGTTTACCAGAATTGAGACCTTAAAGCATCAGATTGAATTTCAGTTGCATGTTTCCTTTATTGAGATTCTCAAAGAAGAAGTAAGGGATTTGTTGGACCCATCCTCTATGAACAAATCAGAGACTGCAAATGGGCATGCAGGGAAAGTGAATATTCCTGGGAAACCACCAATACAAATCCGTGAATCATCAAATGGTGTCATTACTCTAGCTGGATCTACTGAGGTCAGTGTTACAACCCTAAAAGAAATGGCTGCTTGCCTTGAACAAGGATCATTGAGTAGAGCAACTGGGAGCACAAATATGAATAATCAATCCAGTCGTTCACATGCTATCTTCACCATCACATTAGAACAAATGCGGAAGCTCAATAGTCCTGGTGATATCAGTTTAAATGATACAATGAATGAAGAATATCTTTGTGCCAAGTTGCACTTGGTAGATCTTGCTGGATCCGAACGGGCTAAAAGAACTGGGTCAGATGGTCTGCGTTTTAAGGAAGGAGTTCACATAAACAAAGGCCTATTAGCACTTGGTAATGTAATTAGTGCACTAGGTGATGAAAAGAAGAGAAAAGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGCAACAGCAGAACTTTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACTTTGAAGTATGCAAACCGTGCACGCAACATCCAAAATAAGCCTGTGGTCAACAGAGATCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTTGAGTATCTGCAAGCAGAACTTTGTGCTCGTTCTGGTGGCTCTTCCGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCAGCTAACGAGGATCTTCGATGTGAACTTCACGAATACCGTAGTAGATGCTCTACTGTAGAACAATGTGAAAAGGATGCTTATGAAAATAGCACATGTAATGTAAAGACTGATGGGCTTAAGAGGAGCTTACCTATCACAGCATCCGATTATCCAATGAGTGAAACAACAGGGGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCATACTCTTCTGCAAAATAGTATGGATAGAGAGTTACACGAATTGAATAAACGCTTGGAGCAAAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGACGCCGAAGCACTCAAGCAACATTTTGGAAGGAAGATAATGGAACTGGAGGATGAGAAAAGAACTGTGCAGCGAGACAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAATGCAGAAATCAGAGGATATCCATGCCCAAAAATTGAAAACACTTGAAGCCCAGATTCTGGATCTGAAGAAGAAACAAGAAAGTCAGGTCCAGCTCTTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCGAAGCGATTACAAGATGAAATACAATCTATAAAAGCCCAAAAGGTTCAACTGCAACAAAGGATAAAACAAGAGGCTGAACAGTTTCGGCAATGGAAGGCTTCTAGAGAGAAGGAGCTGCTGCAACTAAAGAAGGAAGGAAGGAGAAATGAGTTTGAACGGCATAAGCTGCAAGCTTTAAATCAGCGTCAGAAAATGGTCCTTCAAAGAAAGACGGAAGAAGCTGCTATGGCCACCAAAAGGTTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAGCCGAGACACTTCAGTTGCAATTAATGGAAGTGGAGCGAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTGGAAGTCATGGTAAAAGAGCACGAAGTTCGTTTTGAGTATGAAAAGCAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGTTGGCCATGCTAAAGCAAGTAAATGAGTTAGCTGCCAAGGGTCTCACTCCTCCAAGAGGAAAGAATGGATTTGCGAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCCTCTCTTGAGAGCATGCTGAGCATATCCTCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAGCGGGAACGGGCTTTCACTAATCGTGGACGCTGGAACCAATTGCGTTCAATGGGAGAAGCCAAGAATTTGCTTCAATATTTGTTCAATTCCGTCGGAGATGTTAGGTGCCAACTGTGGGAGAAGGACACTGAGATTAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGTCTGTTACGACAGAGTGAAAGCAAGAGAAAGGAAGCTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTACAACTACATTGGCTACGCCAACTTCTGGAAACCCTCCAAATTCATTGAAACACTATGCAGAAGACATCAAGGAACCATTATCTCCAGAGTCTGTGCCAGTACAGAAGCAGCGCAAATACATGCCAGGCATCACCAACGGCCATGTGAGGGAATCAGCAGCATTTATAGATCAGAGTAGAAAGATGATACCTGTTGGGCAACTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGTAAGCTATGGAGGTGGAAAAGAAGCCACCATCAGTGGCTACTACAATTTAAATGGAAGTGGCAGAAGCCATGGAGACTTTCTGAATGGATTCGGAACAGTGATGAGACAATCATGAGAGCAAGGCCACGACCGCAGGCTTTAACGCATGTCATGGTAATATTAATGGTTGCTGACAATAACATTATATATACTGCTCGAATGTTGGAAATGTTTCTGTTGTTTGCTGCGTATGAAGCATCTTGTGGGGTGTGCAAAGATGTAGCTGATGGCTATCCAAATAATCAAGAATAG 3468 0.4354 MVEAGEDCCVKVAVHVRPLIGEEKVQGCKDCVTVVQGKPQVQIGTHSFTFDHVYGSTGSPSSVMFNECVASLVEGLFHGYNATVLAYGQTGSGKTYTMGTGFKDGFQEGIIPQVMSSLFTRIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMNKSETANGHAGKVNIPGKPPIQIRESSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNSPGDISLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTFMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMRQQLEYLQAELCARSGGSSEEVQVLKERIAWLEAANEDLRCELHEYRSRCSTVEQCEKDAYENSTCNVKTDGLKRSLPITASDYPMSETTGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGISDAEALKQHFGRKIMELEDEKRTVQRDRDRLLAEVENLAANSDGQMQKSEDIHAQKLKTLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSSRDTSVAINGSGANGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNELAAKGLTPPRGKNGFARASSMSPNARMARIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYLFNSVGDVRCQLWEKDTEIREMKDQIKELVGLLRQSESKRKEAEKELKVREQAVTTTLATPTSGNPPNSLKHYAEDIKEPLSPESVPVQKQRKYMPGITNGHVRESAAFIDQSRKMIPVGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRNSDETIMRARPRPQALTHVMVILMVADNNIIYTARMLEMFLLFAAYEASCGVCKDVADGYPNNQE 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00928 1074 Gene3D Kinesin motor domain 2 392 IPR036961 -
Pste8g00928 1074 Coils Coil 491 511 - -
Pste8g00928 1074 Coils Coil 672 692 - -
Pste8g00928 1074 MobiDBLite consensus disorder prediction 691 716 - -
Pste8g00928 1074 Coils Coil 517 558 - -
Pste8g00928 1074 FunFam kinesin-like protein KIN-4A isoform X1 3 392 - -
Pste8g00928 1074 MobiDBLite consensus disorder prediction 696 716 - -
Pste8g00928 1074 CDD KISc_KIF4 8 365 - -
Pste8g00928 1074 MobiDBLite consensus disorder prediction 152 175 - -
Pste8g00928 1074 Coils Coil 862 896 - -
Pste8g00928 1074 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 4 1021 IPR027640 GO:0003777|GO:0007018
Pste8g00928 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 395 IPR027417 -
Pste8g00928 1074 Coils Coil 591 639 - -
Pste8g00928 1074 Coils Coil 404 431 - -
Pste8g00928 1074 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pste8g00928 1074 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 PRINTS Kinesin heavy chain signature 314 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 ProSiteProfiles Kinesin motor domain profile. 9 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 SMART kinesin_4 7 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 Pfam Kinesin motor domain 17 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00928 1074 Coils Coil 567 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00928 Pste-Chr8 4835825 4848219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00928 10 388 Calmodulin-binding Proteins AT5G65930 33.159 4.94e-54 204