Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00924 TCATCCAAACAAGTTATAAAAAGAAACATCTTTGTTCAACACCATCAAATGATTCTTACATCCAAACACTGCACCTCTTTGCTTGTCCCTTTTCCCGATTAATGTTACTATGGCTGTCACAGACGGGGATGCGATTGCGGTGCAGGAAGAGGCTTCCGCCGGCATTCACACCGTCGTCAACATAATTTCTTCCAATCCTGCTTCTGAGGATCTGGAAGCCGTTGCTGACGTGGCAGTTAACCGGTTCAGAGAGGTTATTTCGCTCCTTCACAAACCTCGAACCGGTCACGCTCGTTTCAGAAGGGCACCTACCACACTGCCACCTGTCCCCGTTGTTCAGTTGCAGCAGCAGCACCACCAACATAAGAAAGAACAAAAACAACAAACATCTGTTACATCTGCTTTCAAGGTTTATTGCCCTGCTCCTCCTCTGCCTCGAAATCACCACCACCAACACCCACCTTTTATTTTTCCTCCACCGAACATCAACGATACCAACTCCTACGTTTCTACGTTAACCGGGGACAGCCACAGTTTGCCACCTTCTTCCGGGTTTCAAATTTCTCACGTGTCACTGCAGGGTCATGCTTTTATCCGTAAGCCACCTCTTTCTTCAAATTCTGTCAAGAGGAAGTGCAATTCAACTGGTTTTCCTGATACCAACTGTGGATCATCATCCTCTGCTCACTGTCATTGCTCCAAGAAAAGGAAATTGAGGTTGAAGAGAGTGATTAGAGTGCCGGCTATTAGTTCCAAGACTGCTGATATCCCACCAGATGAGTTTTCGTGGAGAAAATATGGACAGAAACCTATCAAAGGTTCTCCACACCCGAGAGGTTATTACAAGTGCACCAGCGTGAGAGGGTGTCCTGCACGTAAACACGTGGAGCGTGCTGTGGATGATTCCAACATGCTCGTTGTCACCTACGAAGGAGAACATAATCACTCGCACACCAATTCAGAGGTGCGTAGTGTTATTCTTGAATCATCTTAGTCATTGGTCAACCTTAACCTTAAGGACTAAGGCACATATATGGGGGTTTCTTAATCTCCTCTTTTCTCTTGAAGTAGTTATTTTAAAATTCATTGAAATACTTAATACTTAGATACAGGAATATTGGTTGGTCTTTGTAAGACTTATTATATAGAAAATGTAAAGAAATTAAACAGAGCAGAGGTTTTGTTGCATGGAGATATTTGTTTTCATGGATATTATTTTGGTTGCATATATAATATAGTTGTCTTAGTGTGAATTTGATTGAAAAGGGGGTAGGTGTATAGTCACGGCTGCAAGGGCTGGAGAATATTGTTGCATTGCTTTGATTTGATGGGGTGGATTTGGTGGGATTTAAGTTTGAAAGTTGAAGAGAAAACCTCAGTCATCATCATTTGTGAAAGCACTACGCGTGATGCTATTTTTGCATATTTACGTTTGAACTTTGAACGAGGATGAAGCAATGAATGGTTTGAGAAATTTTGGACAACCTAACGAGAGATTTGTTGACTTTTGAGGGTCCTGACTCGACCTAAATTGGCAGCAAATGAAAAGTCAGAATGTGAATTGTAGAGTTGAAAAATCGTCTCTCAATTTGAATATCAGGTCCTTTTTATTGTGGGATTTTAAAGTTGAGAATTTTGCAGTACTTGTACCAATTTGTGTGGTACAGTGTATACAAAGACAAAAGACCACATTGGCTTCATTTTATG 1707 0.4159 MAVTDGDAIAVQEEASAGIHTVVNIISSNPASEDLEAVADVAVNRFREVISLLHKPRTGHARFRRAPTTLPPVPVVQLQQQHHQHKKEQKQQTSVTSAFKVYCPAPPLPRNHHHQHPPFIFPPPNINDTNSYVSTLTGDSHSLPPSSGFQISHVSLQGHAFIRKPPLSSNSVKRKCNSTGFPDTNCGSSSSAHCHCSKKRKLRLKRVIRVPAISSKTADIPPDEFSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDSNMLVVTYEGEHNHSHTNSEVRSVILESS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00924 294 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00924 294 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00924 294 Pfam Plant zinc cluster domain 173 219 IPR018872 -
Pste8g00924 294 SUPERFAMILY WRKY DNA-binding domain 217 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00924 294 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00924 294 FunFam WRKY transcription factor 65 205 282 - -
Pste8g00924 294 Gene3D WRKY domain 208 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00924 294 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 285 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00924 Pste-Chr8 4818191 4821281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00924 7 279 WRKY Transcription Factor Family AT2G24570 39.414 3.11e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g00924 WRKY 4.6e-26 CL0274