Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00921 ATGAGGAGAATGATGTTGTGGAGCATATCAGTGTTGATGTTGGTGATCGGAAGATGTGATTCCCAACAAGAGTACGTAAACAACAAACAGCTGGATTGCGATAATGAATACAAGGCCACAAAGGGGAACCTCTGCAACAGTGTTCCATCATGCACATCGTATCTGACATTTAAGTCGTCATACGAGTACAACACGGCGGTCTCAATAGGGTACCTTCTGAACTCGAGCCCTCCGCTGATCGCAGCCGCAAACAACCTGACAGACGTGGAGTCAATACCCAGAGACACGCTGGTGTCGGTCCCGGTGAACTGCTCGTGCTCGGGGGCATACTACCAGCACAACGCCTCATACAGCATCAAGGTTCAAGGCGAAACCTACTTCTCCATCGCCAACAACACCTACCAGGCCCTGACCACCTGCCAGGCTCTCATGCTTCAAAACTCCTACAACCTTCGCCACCTCCTCAAGGACCAAACCCTCCACGTTCCTCTCCGCTGCGCCTGCCCCACCAACACACAGCGCCAAGCAGGCTTCAAATACTTGCTCACCTATTTGGTTTCTCTTGGTGATTCCCCTTCTTCCATTGCTGATATCTTCGGCCTTGACCTACACTCCCTTCTCCACGCCAATCAGCTTTCTGCCACTTCTTCTATTTTCTACTTCACTCCCATTTCTGTTCCTTTGAAAACAGAGCCCCCCACCTCCATACCCAAAACAGCCCCTTCCCCCCAGGATGCCCCTTTGCCTCCAACAACCCCTGCTTCTTCTGTTGACTCCGATTCTCACTCTTCCACCAAATGGGTTCTTGTCGGAGTCCTCGTTTCCCTTTTTCTGTTGCTTCTTTTGGGTTTTGCTCTGTTTGTCCTCTGTTTCTATCGCCGCCGACTCCACTCTCCTCCTCCGCCTCCTCCTCTGCTTCCGGCCAATGTTTCCTCCAACGGGGCAACTGTTCCGACTAGTAAATCTTGGTCTCTTTCTTCGGAAGGGGTTCGTTACGCGGTTGAGTCGTTGCGTGTGTACAAGTTTGAGGAGTTGCATAATGCCACGGGGTTCTTTAGTGAAGAGAACAAAATTAAGGGTTCTGTTTACAGGGCTTCTTTCAAGGGTGATTATGCTGCAGTTAAGGTTCTCAAAGGGGATGTGTCTGGTGAGATTAACCTTCTGAAGAGGATTAACCACTTCAACATTATTAGGTTGTCCGGTTTTTGTGTCCACAAAGGTGACACTTATCTTGTGTATGAGTTTGCTGAGAATGATTCTCTCGAGGATTGGCTTCACAGTGGTAATAAGAAGTACGAGCATTCGGCGTCTTTGAGTTGGGTGCAGAGAGTTCATATTGCTCATGATGTTGCTGATGCGCTTAATTACCTTCATAACTATACCAGTCCTCCTCATGTGCATAAGAATTTGAAGAGTGGGAATGTGCTTTTGGATGGGAATTTTAGGGCTAAGATTTCAGATTTTGGGTTGGCAAGAGCAGTGGAGGATCAAGGAGGTGATGGGGGGTTTCAATTGACAAGGCATGTGGTGGGGACCCAAGGGTACATGCCACCTGAGTATATTCAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCATTTGGGGTTGTGATTTTGGAGCTTCTTTCTGGGAGAGAGGCAGTTAGTGGGGAACAGATGCTGTCGGTGACTGTGAATCAGGTGCTTGAAGGGGAGAATATTAGAGAGAAGCTTCGAGGTTTCATGGATCCAAATTTGAGGGATGAATATCCTTTTGAACTAGCTTACTCCATGGTTGAACTTGCCAAATGCTGTGTTGCTAATGACCTTAATTCAAGACCACAGATTTCTCAAGTGTTCATGACTTTGTCCAAGATTCAGTCCTCTTCCTTGGATTGGGACCCGTCTGATGAGGTTGAACGGTCTAGGTCGGTCAGTCAAATCTCTGATAGCAGATAG 1941 0.4781 MRRMMLWSISVLMLVIGRCDSQQEYVNNKQLDCDNEYKATKGNLCNSVPSCTSYLTFKSSYEYNTAVSIGYLLNSSPPLIAAANNLTDVESIPRDTLVSVPVNCSCSGAYYQHNASYSIKVQGETYFSIANNTYQALTTCQALMLQNSYNLRHLLKDQTLHVPLRCACPTNTQRQAGFKYLLTYLVSLGDSPSSIADIFGLDLHSLLHANQLSATSSIFYFTPISVPLKTEPPTSIPKTAPSPQDAPLPPTTPASSVDSDSHSSTKWVLVGVLVSLFLLLLLGFALFVLCFYRRRLHSPPPPPPLLPANVSSNGATVPTSKSWSLSSEGVRYAVESLRVYKFEELHNATGFFSEENKIKGSVYRASFKGDYAAVKVLKGDVSGEINLLKRINHFNIIRLSGFCVHKGDTYLVYEFAENDSLEDWLHSGNKKYEHSASLSWVQRVHIAHDVADALNYLHNYTSPPHVHKNLKSGNVLLDGNFRAKISDFGLARAVEDQGGDGGFQLTRHVVGTQGYMPPEYIQNGLITPKMDVFAFGVVILELLSGREAVSGEQMLSVTVNQVLEGENIREKLRGFMDPNLRDEYPFELAYSMVELAKCCVANDLNSRPQISQVFMTLSKIQSSSLDWDPSDEVERSRSVSQISDSR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00921 646 MobiDBLite consensus disorder prediction 234 250 - -
Pste8g00921 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 630 - -
Pste8g00921 646 Gene3D Phosphorylase Kinase; domain 1 325 415 - -
Pste8g00921 646 ProSiteProfiles Protein kinase domain profile. 276 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00921 646 ProSiteProfiles LysM domain profile. 182 226 IPR018392 -
Pste8g00921 646 MobiDBLite consensus disorder prediction 624 646 - -
Pste8g00921 646 Pfam Protein kinase domain 379 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00921 646 MobiDBLite consensus disorder prediction 232 258 - -
Pste8g00921 646 Gene3D Transferase(Phosphotransferase) domain 1 416 639 - -
Pste8g00921 646 SUPERFAMILY Protein kinase-like (PK-like) 326 614 IPR011009 -
Pste8g00921 646 MobiDBLite consensus disorder prediction 628 646 - -
Pste8g00921 646 Pfam LysM domain 184 227 IPR018392 -
Pste8g00921 646 FunFam PTI1-like tyrosine-protein kinase 3 416 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00921 Pste-Chr8 4790436 4792376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00921 11 639 Receptor kinase-like Gene Family AT2G33580 52.782 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste8g00921 Pkinase 1.4e-39 CL0016