Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00901 GTTCTTGACTTTGTGTTCCTCTTCAATAGACTTCACAAATTTTGTATACTACCACCTAATGGAACGGAGATTCAGATTATCGATTGTCTTCTTCATGTGTGCATCTATATTGTTTATTGCAGAATCCAAGTGTAGCAGCGGTTGTGATTTAGCTCTAGCTTCTTACTATCTACCCCAAGGTAACTTGACATATATATCAAAGCTTATGAAATCCGAGGTTCTTTCAAAACCTGAAGATATTGTCAGCTACAACAATGGCACCATAAAAAGCAAAGACCAGGTGCCAGGCTTTATTAGAGTGAACGTTCCTTTCCCTTGTGGTTGCGTTAATGGTGAGTTTCTTGGCCATATATTCCAATACAACCTTGCAGCAGGAGACACTTACATGTCCATTGCCAGTCAGAATTATTCGAATTTGACCACTGCTGAGTGGTTGCTGAACTTCAACCAATATCCACCAACTGGTATTCCTGATACTGGAACTCTTAATGTCATGATTAACTGTTCTTGTGGGGATGCAAAAATTTCCAAGGAATATGGATTGTTCATCACATACCCTCTTAGACCTGAGGATTCTTTGCAGTTAATTGCCAACCAGACTGGGGTTGAGAGTGACGTCCTGGTTAAGTACAACCCCAGTGTAAATTTTAGCCTAGGGAGTGGTCTGACCAAAATGGTAGCCATTTGCCCCTTCATCCAAGGTCTTGCAGGTGGGATTATCGCTGGCATATCTGTTGGAGTAGTAATAGGACTTCTGATATTGGCATTTTTGGTGTATGTAAGAAGAAAGAAGGTATGGAAGAAGAAATTGCTCTCAGAAGAATCCAAGATGATCTCTGCTAGAGTTGAGAGTGATGAAACCTCTGGCGATCCTGCTGCAGAAGGTGGTACTAACACCATTGGCATTAGGGTGGATAAATCAGCAGAATTTTCCTATGAAGAACTAGCCATTGCCACAAATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGAAGTCTATTTTGCAGAGCTGAACGGTGAGAAAGCCGCAATAAAAAAGATGGACATGCAAGCAACAAAAGAATTTCTAGCTGAACTGAAAGTGTTGAACAGAGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGTGTAGAGGGCTCCCTTTTCCTTGTCTATGAATACATTGAAAATGGCAACTTAGGACAGCATCTACGTAAATCAGGTTTCAACCCTTTGCCATGGTCTACCCGAATTCAAATTGCTCTGGATTCAGCCAGAGGTCTTCAATACATTCATGAGCATACGGTGCCTGTATATATCCATCGTGACATAAAGTCAGAAAATATTTTAATTGACAACAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGTTGATTGATGTTGGAAGTTCATCTCTTACCACTGCTAATATGAAGGGAACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCGCCCAAAATCGATGTCTATGCTTTTGGAGTTGTTCTTTTTGAACTAATTTCTGCTAAAGAAGCATTGATAAGGAGTGGTGCATCTGGTGCTGAATTAAAGGGCCTTGTATCTTTGTTTGATGAAGTTTTTGATCAGCAAGATCCCACAGAAGGTCTTAAGAAACTGGTGGATCCTAGGCTTGGAGATAACTACCCTATGGATTCAGTTTGCAAGATGGCACAACTTGCAAAAGCATGCACAGAGAGCGATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCGCTTATTTCAAATACTGAAGATTGGGATTTTGCTTCCATCATTGAAAATCCAACTCTGGCGAATTTAATTCCAGGGCAGATACTCTTAGAAAATATAACGCGTTTGATGGAATCGAGAGTTATATCCAATTCTAACGTTATAACCAGCTATAATGAAGGCAAAATATATAATAATATTCTGCTATCCTTTACCAGACTCAATATTCCATTCCCCTGTGACTGTATTGATGGTGAGTTTTTGGGGCATGTGTTTGAATACTCAGCTGCTGCAGGTGACACCTATGATTCCATTGCCAAAGTGACATACGTTAATCTCACTACTGTTGAGCTTTTACGGAGGTTCAACAGTTATGGCCAAAACGATATACCTGCAAATGCCAAGGTTAATGTCACGGTCAATTGTTCTTGTGGGAGCAGCCAAGTTTCAAAACGTTATGGGCTGTTTATTACCTATCCACTTAGGCCTGGGAATAATTTGGCTGATATTGCCAATGAAACCCAAGTTGATGCAGAGTTGCTGCAGAAGTACAATCCCGGTGTCAATTTCGGCAAAGAGAGTGGGATTGTTTTCATTCCTGGAAGAGAATATGAAACTTCAGGATCCAGTGGGATTGCTACTGCTGGTGCAACTAGTCTTACAGGCATCATGGTGGCAAAATCAATGGAGTTCTCGTATCAAGAACTAGCTAAAGCTACAAATAACTTCACCTTGGAAAATAAAATTGGTCAAGGGGGATTTGGAGCTGTCTATTATGCAGAACTAAGAGGCGAGAAAACTGCAATCAAGAAGATGGATGTGCAAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGGAAAGACCCATTGCCATGGTCTAGCCGAGTGCAAATTGCACTAGATTCAGCAAGAGGCCTAGAATATATTCACGAGCACACTGTGCCTGTGTATATCCATCGTGATGTAAAATCTGCAAACATATTAATTGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGAGGCTCCACACTTAATACTCGTCTTGTGGGAACATTTGGATACATGCCACCGGAATATGCTCAATATGGTGACGTTTCTCCAAAAGTAGATGTGTATGCTTTTGGAGTTGTCCTTTATGAACTTATATCTGCAAAGAATGCTGTTTTAAAGACAGGTGAAAGTGTTGCTGAATCAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCGGAAGGTATTCGCAAATTGGTGGATCCAAGGCTTGGAGAAAACTACCCAATAGATTCAGTTCTCAAGATTGCCCAACTTGGAAGAGCTTGTACAAGAGATAATCCACTGTTACGCCCAAGTATGAGGTCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGCGATGATGACACTTCCTACGAAAATCAAACTCTCATAAATCTACTGTCAGTGAGA 3382 0.4048 MERRFRLSIVFFMCASILFIAESKCSSGCDLALASYYLPQGNLTYISKLMKSEVLSKPEDIVSYNNGTIKSKDQVPGFIRVNVPFPCGCVNGEFLGHIFQYNLAAGDTYMSIASQNYSNLTTAEWLLNFNQYPPTGIPDTGTLNVMINCSCGDAKISKEYGLFITYPLRPEDSLQLIANQTGVESDVLVKYNPSVNFSLGSGLTKMVAICPFIQGLAGGIIAGISVGVVIGLLILAFLVYVRRKKVWKKKLLSEESKMISARVESDETSGDPAAEGGTNTIGIRVDKSAEFSYEELAIATNNFSLANKIGQGGFGEVYFAELNGEKAAIKKMDMQATKEFLAELKVLNRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLGQHLRKSGFNPLPWSTRIQIALDSARGLQYIHEHTVPVYIHRDIKSENILIDNNFCAKVADFGLTKLIDVGSSSLTTANMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLFELISAKEALIRSGASGAELKGLVSLFDEVFDQQDPTEGLKKLVDPRLGDNYPMDSVCKMAQLAKACTESDPQQRPNMSSVVVTLTALISNTEDWDFASIIENPTLANLIPGQILLENITRLMESRVISNSNVITSYNEGKIYNNILLSFTRLNIPFPCDCIDGEFLGHVFEYSAAAGDTYDSIAKVTYVNLTTVELLRRFNSYGQNDIPANAKVNVTVNCSCGSSQVSKRYGLFITYPLRPGNNLADIANETQVDAELLQKYNPGVNFGKESGIVFIPGREYETSGSSGIATAGATSLTGIMVAKSMEFSYQELAKATNNFTLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGGSTLNTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKNAVLKTGESVAESKGLVALFEEALNQSNPSEGIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDTSYENQTLINLLSVR 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00901 1108 ProSiteProfiles Protein kinase domain profile. 810 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00901 1108 FunFam PTI1-like tyrosine-protein kinase 3 374 587 - -
Pste8g00901 1108 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 586 IPR044812 GO:0019199|GO:0045087
Pste8g00901 1108 CDD STKc_IRAK 816 1077 - -
Pste8g00901 1108 SMART serkin_6 303 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00901 1108 SMART serkin_6 810 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00901 1108 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Pste8g00901 1108 SUPERFAMILY Protein kinase-like (PK-like) 285 573 IPR011009 -
Pste8g00901 1108 SUPERFAMILY Protein kinase-like (PK-like) 790 1080 IPR011009 -
Pste8g00901 1108 Gene3D Phosphorylase Kinase; domain 1 277 373 - -
Pste8g00901 1108 Gene3D Transferase(Phosphotransferase) domain 1 881 1103 - -
Pste8g00901 1108 Gene3D Transferase(Phosphotransferase) domain 1 374 590 - -
Pste8g00901 1108 Pfam Protein tyrosine and serine/threonine kinase 305 572 IPR001245 GO:0004672|GO:0006468
Pste8g00901 1108 Pfam Protein tyrosine and serine/threonine kinase 811 1078 IPR001245 GO:0004672|GO:0006468
Pste8g00901 1108 ProSitePatterns Protein kinases ATP-binding region signature. 816 838 IPR017441 GO:0005524
Pste8g00901 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Pste8g00901 1108 ProSiteProfiles Protein kinase domain profile. 303 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00901 1108 Gene3D Phosphorylase Kinase; domain 1 790 880 - -
Pste8g00901 1108 FunFam LysM receptor kinase 2 789 880 - -
Pste8g00901 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Pste8g00901 1108 FunFam LysM receptor kinase 2 282 373 - -
Pste8g00901 1108 FunFam PTI1-like tyrosine-protein kinase 3 881 1094 - -
Pste8g00901 1108 CDD STKc_IRAK 309 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00901 Pste-Chr8 4655517 4668859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00901 639 793 Receptor kinase-like Gene Family AT3G21630 46.296 8.33e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste8g00901 PK_Tyr_Ser-Thr 2.6e-43 CL0016