Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00893 ATGGATAGAAATGCTGTATTTGGTGGTGTTAGAGAGGGTGGAGAGCGCGGTGTTCGGGTTACTCGAGCAATGGCCAGAGCTATGGGAGGGGTCTGTGCCTCTTCAAAGCCGTCTTTTAAGAAGGAAGGCAAAAATAAGAAGAAATCTTTAGATAAGGGCAGGACAGTGCTGGCAGATGTAACTAACATAAGAGGAGGTTGTAAGAAGAAAAGCACAAATGGAGTTTCCAATGCCTCCATACAAGTATCATCAACTCAAGGACATGTTAGAACAAACATAGCAAAAGATTTATCGACAACATCAACATTACAGTCTCATGACAGTATAGTAGCTGAAAGGCTGGAAGACCGAGAGCTAGTGCTACCTTGTGTGTCCATTAGCATGAGAGGACATGTTATGGAAGACATTGATATGATTTCTGAGGAACTAAAACATTCAGATGGTTTGGGCATTGTAGACATTGATTCAGTGGAGTTAAAGGATCCTTTAATTTGGAGTTCATATTCCCCTGATATATACAGTAATATATGTGTAAGAGAGTTCGAAAGGAGACCGTTAGCTGATTACATGGATGAGTTGCAGCAAGATATCACTCCAAGCATGCGAGGGGTTCTTATTGATTGGCTTGTGGAGGTTTCTGAGGAATACAAGCTAGTTCCAGATACTCTATACCTTACAGTGAATCTCATTGATCGGTTTCTTTCTCGAAGTTTGATTCAAAAACAAAGGCTCCAGTTGCTGGGTATTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCCAGTGGAAGAATTTTGCTTCATCACGGATAATACGTACACAAAAGCAGAGGTGTTAAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAACTATCTGTTCCCACCACTAAAACATTTCTCAGTACTCTAAATGTTTCTTATGTTGAACTGGACTTTCTGGTAAATTATTTAGCAGAGCTTACACTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCTCTCATAGCTGCATCTGCTGTATTGCTTGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATTCAACCATGGAGCACTATACAAATTACAAAATGTCAGAACTTAAAACTACTGTCCTTGCACTGGCAGATTTGCAACTTGATACCAAAGGCTGTCCTCTGAATGCTATACGCGAAAAATATAAACAGCAGAAGTTCATGAGTGTGGCAAATTTGCCTCTGAAACCAGTGCAGTCACTTTTCCAGTCTCAAGTATAAAACTGTAAATGATGCATCATCTCTGAAGACTAAAATATTGACTTTCGGAATTTCTGATATAGGAAAGGTGTATTATCCTTGGTTGTAATTATTTGATCATCTAATTATTGTTTTTCCAATTACAGTCTGATCAGTAGTTGTAACTTGTAGGATGGTACCAAACTCTGGTACTTCTAGATTTTGTAACGTGAAATCGTTACATCATGAATCATGATACAATTAAAGCTGTGAATTGTAGTAATGGCATCAGTTTTAGACTCCATTTTCAGGGAGCATTTAGGCAGCTAGCTATGCAAGTGCTTGATATTTACTTTTGTGCAATAAAAAGGTGCACTGAAATGGGTGTAATTTATCTTTAGACAAAA 1643 0.3877 MDRNAVFGGVREGGERGVRVTRAMARAMGGVCASSKPSFKKEGKNKKKSLDKGRTVLADVTNIRGGCKKKSTNGVSNASIQVSSTQGHVRTNIAKDLSTTSTLQSHDSIVAERLEDRELVLPCVSISMRGHVMEDIDMISEELKHSDGLGIVDIDSVELKDPLIWSSYSPDIYSNICVREFERRPLADYMDELQQDITPSMRGVLIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSRSLIQKQRLQLLGITCMLIASKYEEICAPPVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSVPTTKTFLSTLNVSYVELDFLVNYLAELTLVEYSFLQFLPSLIAASAVLLARWTLNQSEHPWNSTMEHYTNYKMSELKTTVLALADLQLDTKGCPLNAIREKYKQQKFMSVANLPLKPVQSLFQSQV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00893 425 PIRSF Cyclin_A_B_D_E 13 424 IPR046965 GO:0016538|GO:0044772
Pste8g00893 425 Gene3D - 171 411 - -
Pste8g00893 425 SMART cyclin_7 304 384 IPR013763 -
Pste8g00893 425 SMART cyclin_7 207 291 IPR013763 -
Pste8g00893 425 Pfam Cyclin, N-terminal domain 171 298 IPR006671 -
Pste8g00893 425 FunFam Cyclin A1 287 411 - -
Pste8g00893 425 CDD CYCLIN_AtCycA-like_rpt2 300 406 - -
Pste8g00893 425 SUPERFAMILY Cyclin-like 160 297 IPR036915 -
Pste8g00893 425 FunFam Mitotic cyclin 6 185 285 - -
Pste8g00893 425 SMART Cyclin_C_2 300 415 IPR004367 -
Pste8g00893 425 Gene3D - 185 298 - -
Pste8g00893 425 Pfam Cyclin, C-terminal domain 300 413 IPR004367 -
Pste8g00893 425 PANTHER CYCLINS 125 403 IPR039361 -
Pste8g00893 425 ProSitePatterns Cyclins signature. 202 233 IPR006671 -
Pste8g00893 425 SUPERFAMILY Cyclin-like 299 414 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00893 Pste-Chr8 4589401 4595614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00893 15 412 Core Cell Cycle Gene Families AT5G25380 50.688 1.51e-132 387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00893 8 4589401 4595614 Pste2g01878 2 19171644 19177723 PCT