Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00887 TCTGTGCATCTTTTCCCCCCTTCCCCTTTTAACTTCTCGTGTTACATTCTCTCATATCCGAAAATTTTCACCCATACAAACTTCTTTGAACAAAAACAGTCCATAACAATTTCAAAATACCACATACCCACAAAGAAAAAAACAGTCTTTATTACTTTCTCCTGTTGTGCAGTCATGCCTTCCTTCTTTCACATGCCCAATATTCATTCTTCCCTCCCAAGCTTTTGATTCTTCCATCACTTTACCAAACAACAAAACCCTAGATTTTCTCTTTTCAATCACTTAATTCTCTGAGTTCTTCACCGAAAAGAAAAAAGATACTAAAAATTTTCCCTTTTTAGTTTTCCTTTCAATCACATCCCCATGTCAATTCTCTGATTACTTGATTTATTCAACTGTTTCTGTCATTTCCCCTTTGCATAAATCCCAATTTCGTCACTTGGGTCTCTGAAAAATTGACACCTTTACCTCTCGGATCACGAATGGTTTGCAGTTGCTGCAACAATGTCAGATGACATGCTCATTCATTTCTCATCCAACTCTTCCAACCAATCAGATCAGTCTCTGCCGACAAAGATTGCAAAGTTGGAAGCTCGCATGGTTGGTAAGGGTGCCTCCACCACTGCTCAGCAACCAGGTTGGTCCTCTGTGTCCGTTCCTTCTGCTGGGAAATTTTGTGGAGCTGCTGAAAATTTGGCTGAACCGTCTACTTCCAGTGATTCTGATGATGATAATGGTGGGGAATTCTTAATACAAGCCAACACACAGAAACGCCAAAAACTTCAAGAAGATAGTAGCCCAAGTGTTTTTGAACATGTTGAGGTTGTTACCGAGGGAAGGCAAACTAGTTTGGAGACTGTGGAGACAAAAATGAATGTTGATGTGAATAGAAAGAAACATGGCCGTGGAAGAGGGAGTTCTGGTTCAGGTAGAGGTCGTGGTTCCAGAGTTAATGATCAGACCAGAACACAAATTTCTCCTCCACCTGTTCTGGCTTCAAATGGTCAGATGGAGAATGTATACCATAAAGATGTCAGACTCAGTGATCAGTCTCATGGTGATAATTATGCTTCATTAGAGGAGGAGGTTGCATCTTTACAAGCAAAAGTTGTTGCATTGGAGGAGGAATTGCATAAATCAAAGCAAAATGCTGCTGATTATCAGAATCTTTACCGACAATTAGAAAAGGAACTGAAGGAGCTGAATGATCATGAACAGCAAATGAAACCTAAGAGAATGAAAATAATATCTGACTTGCTGATATCTGTTTCAAAGGCTGAGAGACAGGAAGCAAGACTGAAAAAACAACTAATAGAAACAAAGGAGGCAATTGAGCGACAACGCAAATTATTTAAGAAAAAACAATCTGATAAAGGTGATGGAACAGATGCAGAAACTGGATTACCAGAAGATATTCTAATTCACGATGAAATTTACAAATCTCGATTAGCTAGCCTTAAAAGAGAAAATGTTCAGGAAGAAGAAATTATTTTGCGGGAGAGGGATCGATATGAAATAGAGAAGGGGAGATTAATTCGTGAAATGAAACGTATACGCGATGAAGATGGTTCACGATTTAACAACTTTCAGATTCTAAATCATCGTTATGCTCTTCTTAACCTTCTTGGAAAGGGAGGATTCAGTGAGGTGTACAAGTGGTTTGAAGTAAGAAATTTCCAGCAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGCAAACTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGGCATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATTGTCACATTGTTCGTTTATGGGACATCTTTGAAATTGATCAAAACACATTCTGCACAGTTCTAGAGTATTGTAGTGGGAAGGATCTTGATGCTGTACTGAAAGCAACACCTATATTACCTGAGAGGGAGGCTAAGGTCATCATAGTTCAGATTTTTCAAGGCCTTATTTACATGAATAAAAGAACTCAGAAGATTATCCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGTGTTGCCAAAGTAACTGATTTTGGTCTTAGTAAGATAGTGGAGGATGATGTGGGATCTCAGGGTATGGAACTTACCTCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACGCCTCTTATATCATCAAAGGTTGATGTGTGGTCTGCTGGTATTTTGTATTATCAAATGCTCTTTGGAAGACGACCGTTTGGGCATGACCAAACCCAAGAGAGAATACTTCGTGAAGACACCATTATTAAGGCACGCAAGGTTGAATTTCCTTCTAGACCTGCTGTTTCTAATGAGGCAAAGGATTTTATCCGACGGTGTCTAACATATAACCAGGCTGAGAGACCAGATGTATTAACCATTGCTCAAGACCCATATCTCACTTTCTCGAAGAAGTGATGGCAGGCATGGTTTGCATCATCCAGATTCCAGAGGAAGAGTGGAGGATCTCTTATTCTAACCTCAGTTAAATTTTGTATAGGTTGTAAAGATTTTGTAATCTTATCAATGAGGGAAAGAGGGAGGGGGTTTTCCCCATTCTGAAAGAAAGTCCAGTTGTCTTTATGCATCATCTTTTGGTCTAAAACAAATGGCATGTGGTCTTGTGCTTACCTTAAAAAGGGTCAGTAAGTATAGGTACTCGCAAGTGAGAAAGAAAGCTTTCATTATTTTTTTCATACTCTTCCTCCCAAATTATAGAATTTGATTGGTTACTTTATCTTTTAACATTTTCCCCTTCCTAGCTGTTTTAAATTTTAATCACTCCATATTTGAAGGGGTTGTTTGGTTACTTTATGTAGGATTGAAATTACCTGTCTCCAAATCCTGACTTTTTTGTAAGGCAAATAATAGTTTTAATGTAGGATCTCTTTCTCCCCCTTCTTCTAACACTTAGACTATTATTGGACTAATTTTATAACTGCTAGCCTATTCTCTGTCCCACCAATATACACATCAATAAAAAAACATAATAAGCC 3050 0.3856 MSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKGASTTAQQPGWSSVSVPSAGKFCGAAENLAEPSTSSDSDDDNGGEFLIQANTQKRQKLQEDSSPSVFEHVEVVTEGRQTSLETVETKMNVDVNRKKHGRGRGSSGSGRGRGSRVNDQTRTQISPPPVLASNGQMENVYHKDVRLSDQSHGDNYASLEEEVASLQAKVVALEEELHKSKQNAADYQNLYRQLEKELKELNDHEQQMKPKRMKIISDLLISVSKAERQEARLKKQLIETKEAIERQRKLFKKKQSDKGDGTDAETGLPEDILIHDEIYKSRLASLKRENVQEEEIILRERDRYEIEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKWFEVRNFQQAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHCHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEREAKVIIVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILYYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTFSKK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00887 655 Coils Coil 188 239 - -
Pste8g00887 655 MobiDBLite consensus disorder prediction 1 23 - -
Pste8g00887 655 ProSiteProfiles Protein kinase domain profile. 368 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00887 655 SMART serkin_6 368 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00887 655 PANTHER MIXED LINEAGE PROTEIN KINASE 11 652 - -
Pste8g00887 655 MobiDBLite consensus disorder prediction 64 80 - -
Pste8g00887 655 MobiDBLite consensus disorder prediction 143 165 - -
Pste8g00887 655 Coils Coil 315 353 - -
Pste8g00887 655 Coils Coil 248 286 - -
Pste8g00887 655 MobiDBLite consensus disorder prediction 123 166 - -
Pste8g00887 655 CDD STKc_TLK 367 649 - -
Pste8g00887 655 Pfam Protein kinase domain 369 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00887 655 SUPERFAMILY Protein kinase-like (PK-like) 360 651 IPR011009 -
Pste8g00887 655 Gene3D Transferase(Phosphotransferase) domain 1 359 655 - -
Pste8g00887 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Pste8g00887 655 MobiDBLite consensus disorder prediction 1 80 - -
Pste8g00887 655 FunFam Serine/threonine-protein kinase TOUSLED 359 655 - -
Pste8g00887 655 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00887 Pste-Chr8 4558718 4567559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00887 351 655 MAP Kinase Kinase Kinase AT3G13530 26.299 1.52e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Pste8g00887 Pkinase 2.5e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00887 8 4558718 4567559 Pste8g00887 8 4558718 4567559 ECH