Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00840 TTGGCACTTATATTTCATAGATCAGCTCCCAAGTTTTTGCAGCACTTAAGCTAATATACTACCTTTATGCATTTACACATCTTGTGCTTCGGATCGTCATGGAAGATAAACTAGCAACAAGTGAAGGACAGCCTATAAGATGTAAAGCTGCGGTTTGCCACAAGCCAGGTTCTCCACTGAGTATTGAAGAGATCATTGTGGCACCGCCAATGCCTCGTGAAGCTCGGATCCGTGTTATATGCACTTCTTTATGTCATAGTGATGTTACTTTTTGGAAGATGCAGGTACCTCCTGCAATTTGTCCAAGAATCCTGGGTCATGAGGCCGTTGGGGTTGTGGAAAGCGTGGGAGAGGATGTAACTGAAGTTGTAAAAGGAGATGTGGTTCTCCCAATTTTCGTATCTGAATGTGGGGAGTGTATAGATTGCAAATCAAGCAAAACTAACCTTTGTTCAAAGTTTCCTTTTGAGGTGTCTCCTTGGATGCCTAGATATGGCACTTCCAGATTCACGGATTTACAAGGAGAAATCATATACCATTTCGCATATGTGTCTAGTTTCAGCGAGTACACAGTGGTTGACATTGCCAATCTAACCAAGATTGATCCCACAATACCACCTAACAGGGCATGCTTACTTAGTTGTGGTGTATCAACCGTTCACTACTCAACAACATTTATTCAATTCAATATTTGGATTAAACTTGCACGTTTAGGGGTAGGTGCTGCTTGGAGAACAGCCCGTGTGGAGCCAGGGACAACAGTAGCTATTTTTGGGCTGGGAAGTATTGGATTAGCAGTTGCTGAGGGAGCTAGGCTTTGTGGAGCGAAAAGAATTATAGGTGTGGATGTCAACCCAGAAAAATATGACATTGGAAAAAAGCTTGGACTCACTGACTTTGTCCGTGCTGGAGAAAGTGAAAACAAATCTGTGAGCCAGAAAGGTCTCTTTCTTTCTATCCCTCTCTCTCTCTCAAAGTGCATCCAAACATGCCTTGGTCTATGGTTTATAGGCGAACAGAATAATGTGATTAAAGCAATAACCAGTGTAATATTCAAGGATGCCCCTAGCACAAAGCTTGAAAAGCCACTAAGCTTAATTGCAATTTGCAGCAATAAATTCTTGACAGATGCAAACTTTTCGAATGTTGATAAAACTGAGGGTTGTGGAAAAACAATAGTTTTAGGATTAGACAAGCCAGGATCCGAGTTGAAACTTAGTTGTAATGAGGTGGTCTTGAGTGGAAAGAGCCTGATGGGATGCTTATTCGGAGGACTGAAACCCAAGTCTGACGTGCCCATTCTCCTTAAACGCTACATGGACAAGGAACTGAATTTGGATGAGTTTGTGACACACGAGGTGGAGTTGAAGGATATAAACAAAGCTTTTGATTTATTGATTGAAGGACAGTGTCTTCGATGTGTGCACGTAAGCTGTGCATTGACTCATCTTGTGCTTTGGATGGCCATGGAAGAGAAACTAGCAAAAAGTGAAGGACAACCCATCAAATCTAAAGCTGCCATTTGCCGCGAGCCAGGTTCTCCACTCAGTATTGAACATATCATTGTGGCTCCACCAATGCCTCGTGAAGCCAGGATTCGTGTTATATGCACCTCTCTCTGTCATAGTGATGTTACGTTCTGGAAGATGCAGGTACCTCCTGCAATTTATCCAAGAATCCTGGGTCATGAGGCTGTTGGGGTTGTGGAAAGCGTAGGAGAGGATGTAACTGAAGTTGCAAAAGGAGATTTGGTTGTCCCAACTTTCGTATCTGATTGTGGAGAGTGTATAGATTGCAAATCAACCAAGAGCAACCTTTGTTCAAAGTTTCCTTTTGAGGTGTCTCCTTGGATGCCTAGACATGGCACCTCTAGGTTTACGGATTTAAAAGGAGAGATCATACACCATTTCCTATTTGTTTCTAGTTTCAGCGAGTACACAGTGGTTGACGTTGCCAATCTAACCAAGATTGATCCCACAATACCACCTAACAGGGCATGCCTACTTAGCTGTGGTGTATCAACAGGGGTAGGTGCGGCTTGGAGAGCAGCAGGTGTAGAACCAGGGTCTACAGTAGCTATTTTTGGGCTGGGAAGTATTGGATTAGCAATTATCATTGAGATGACTGGTGGGGGAGCAGATTATTGCTTCGAATGTGTTGGCATGGCATCATTGATGCTTGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAGTAGTTTTAGGAGTGGACAAGCCCGGATCCAAGTTGAGTCTTAGTTGTAATGACGTCCTGGTTAGTGGTAAGAGCCTCGTGGGATGCTTATTCGGAGGTCTCAAACCCAAGTCTGACGTACCCATTCTCCTTAAACGCTACATGGACAAGGAACTGAATTTGGATGAGTTTGTCACACATGAGGTGGAGTTCAAGGATATCAACAAGGCTTTTGATTTATTGGTTGAAGGACAGTGTCTTCGATGTGGCTCTCCTGCTATTTTTCCAAGAATTATGGGTCATGAGGCAATAGGGGTTGTGGAAAGTGTGGGAAAGGATGTAACTGAAGTTGATAAAGGAGATGTGGTTCTCCCAGTTTTTATATCTGAATGTGGGGAGTGTATAGATTGCAAATCAAGCAAAAGCAAACTTTGTTCAAAGTTTCCTTTCAAGGTGTCACCTTGGATGCCTAGATATGGCACTTCCAGATTCACGGATTTACAAGGAAACATCATACACCATTTCCTGTCTGTTTCTAGTTTTAGCGAGTACACTGTGATTGACATTGTGAATCTAATCAAGATTGATCCAACCGTTCCTCCCAACAGGGCATGCCTCCTCAGTTGTGGTCTATCAACCGGTGCTGCTTGGAGAACAGCAGATGTGGAGCCAGGCTCTACAGTAGCTATTTTTGGGCTCGGTAGTATTGGATTAGCAGGTTGGGGGAAAACAATCATTTTGGGATCGGACAAGCCAGGATCCATGTTGAACATTAGTTGTAGTGAGGTCCTCGTTGATGGAAAGAATCTCATGGGATGCTTAGTGGAACTGAATTTGGATGGCTTTGTCACACATGAAGTGGAGTTGAAGGGTATCAACAGAGCTTTTGATTTATTGACGAAAGGACAAATGAGTTCA 3116 0.4326 MEDKLATSEGQPIRCKAAVCHKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTFWKMQVPPAICPRILGHEAVGVVESVGEDVTEVVKGDVVLPIFVSECGECIDCKSSKTNLCSKFPFEVSPWMPRYGTSRFTDLQGEIIYHFAYVSSFSEYTVVDIANLTKIDPTIPPNRACLLSCGVSTVHYSTTFIQFNIWIKLARLGVGAAWRTARVEPGTTVAIFGLGSIGLAVAEGARLCGAKRIIGVDVNPEKYDIGKKLGLTDFVRAGESENKSVSQKGLFLSIPLSLSKCIQTCLGLWFIGEQNNVIKAITSVIFKDAPSTKLEKPLSLIAICSNKFLTDANFSNVDKTEGCGKTIVLGLDKPGSELKLSCNEVVLSGKSLMGCLFGGLKPKSDVPILLKRYMDKELNLDEFVTHEVELKDINKAFDLLIEGQCLRCVHVSCALTHLVLWMAMEEKLAKSEGQPIKSKAAICREPGSPLSIEHIIVAPPMPREARIRVICTSLCHSDVTFWKMQVPPAIYPRILGHEAVGVVESVGEDVTEVAKGDLVVPTFVSDCGECIDCKSTKSNLCSKFPFEVSPWMPRHGTSRFTDLKGEIIHHFLFVSSFSEYTVVDVANLTKIDPTIPPNRACLLSCGVSTGVGAAWRAAGVEPGSTVAIFGLGSIGLAIIIEMTGGGADYCFECVGMASLMLEAYASCRKGWGKTVVLGVDKPGSKLSLSCNDVLVSGKSLVGCLFGGLKPKSDVPILLKRYMDKELNLDEFVTHEVEFKDINKAFDLLVEGQCLRCGSPAIFPRIMGHEAIGVVESVGKDVTEVDKGDVVLPVFISECGECIDCKSSKSKLCSKFPFKVSPWMPRYGTSRFTDLQGNIIHHFLSVSSFSEYTVIDIVNLIKIDPTVPPNRACLLSCGLSTGAAWRTADVEPGSTVAIFGLGSIGLAGWGKTIILGSDKPGSMLNISCSEVLVDGKNLMGCLVELNLDGFVTHEVELKGINRAFDLLTKGQMSS 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00840 1006 Gene3D - 791 1006 - -
Pste8g00840 1006 SUPERFAMILY GroES-like 792 913 IPR011032 -
Pste8g00840 1006 Pfam Zinc-binding dehydrogenase 672 743 IPR013149 -
Pste8g00840 1006 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 206 274 IPR036291 -
Pste8g00840 1006 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 628 756 IPR036291 -
Pste8g00840 1006 Gene3D - 916 950 - -
Pste8g00840 1006 SUPERFAMILY GroES-like 396 443 IPR011032 -
Pste8g00840 1006 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 900 940 IPR036291 -
Pste8g00840 1006 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 529 543 IPR002328 GO:0008270|GO:0016491
Pste8g00840 1006 SUPERFAMILY GroES-like 464 649 IPR011032 -
Pste8g00840 1006 PANTHER ALCOHOL DEHYDROGENASE 10 442 - -
Pste8g00840 1006 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 800 814 IPR002328 GO:0008270|GO:0016491
Pste8g00840 1006 Gene3D - 463 790 - -
Pste8g00840 1006 FunFam Alcohol dehydrogenase 6 790 921 - -
Pste8g00840 1006 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Pste8g00840 1006 FunFam Alcohol dehydrogenase 6 474 653 - -
Pste8g00840 1006 Pfam Alcohol dehydrogenase GroES-like domain 40 167 IPR013154 -
Pste8g00840 1006 Pfam Alcohol dehydrogenase GroES-like domain 792 894 IPR013154 -
Pste8g00840 1006 Pfam Alcohol dehydrogenase GroES-like domain 496 623 IPR013154 -
Pste8g00840 1006 SUPERFAMILY GroES-like 8 188 IPR011032 -
Pste8g00840 1006 FunFam S-(hydroxymethyl)glutathione dehydrogenase 206 286 - -
Pste8g00840 1006 FunFam Alcohol dehydrogenase 6 18 192 - -
Pste8g00840 1006 Gene3D - 11 203 - -
Pste8g00840 1006 Gene3D - 645 671 - -
Pste8g00840 1006 Gene3D - 672 736 - -
Pste8g00840 1006 Gene3D - 206 288 - -
Pste8g00840 1006 SUPERFAMILY GroES-like 744 789 IPR011032 -
Pste8g00840 1006 Gene3D - 369 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00840 Pste-Chr8 4337496 4355117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00840 459 664 Monolignol Biosynthesis Gene Families AT4G37970 26.087 4.68e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00840 8 4337496 4355117 Pste8g00840 8 4337496 4355117 ECH