Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00834 TGATTGTGCAGGAAGAAGGGTAGGTTTCATGTTTAATAATTATTACAATTATTTGTAGCGCGAGGAACTTAAGTCTTTTTCTCTCTCTTTTTAACTTGAGATTTGTAATTGTAGAAGCAATGAGTGATATTCAATGTGCATTACATTATACAATAGTATGCTCTAAATTTAATCTCTTGGCTTCAAATTTTGTTTGTACACTTGCCCCTTTGCTCTTACTTCCAACGTGGCACACTCCCTCATATAGTCATATGTATTTGTGTTGTTGATTGATACTTGGATTAGGAGCTCTCCTAGGAAAGGCATGCAGGCTATCTGGTTGATGCTATTATTGTTGGTGGTTATTGCATTTGGGAATTCGGATATTGATGCACTCCTTGAATTCAAGAAGAGTATTCAGAATGACCCTTCTGGATTAGTTTTTAATTCTTGGGATTCCAAGTCTTTAGATGCTGATGGATGTCCTCGGAAATGGTATGGGATATTGTGTAGTGAAGGCAGTGTTATATCAATCTCTCTGGACAATGCTGGTCTGGTTGGCGAGTTTAATTTCCTTGCAATTAGTGGCCTTGTAATGCTTCGCAATTTGTCAGTTGTGAACAACCAGTTCACAGGAGATCTCCTACACATTGCTACAATGGAATCACTTGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGGCCGTTAGTCTCTAACATCGTTCAGTTGCGCAAGTTAATATATTTGAATCTTTCTTCAAATGAACTTGGAGGTACTCTTCCTAGTGTGTTTCACAAACTTGGGCAGTTGAAGTATTTAGATATGCATGTGAATAACTTCTCTGGGGATATTATGCGCATCTTTTATCAGATGGGCAGTCTGCAATATGTTGACTTAAGCAGCAACAGGTTTTCTGGTACGCCAGATTTGGGACTTGCAGATGAGTCATTTCTCTCTTCCATTCAGTATTTAAATATTAGCTGTAATTCCTTGAGTGGTGAGTTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAAGGCAAAATACCTTCCTTCACGTTTGTGGTCTCTCTTCGGATTCTTCGACTTGCATGCAACCAGTTGACTGGTTTACTGCCCGAAGCTTTATTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTCAGTCAAAACAAGCTTGAAGGTCCCATTGGAATTATTACCTCCGTGACTCTGAGGAAGCTTAATTTATCTTCAAACCAATTGTCTGGCCCTTTACCTCTCAGGATAGGCCGCTGTGCCATCGTAGATTTTAGTAATTTCTCAAGGATCGGATACTGGGGCAACTATGTGGAAGTTGTTCAGCTAAGTACCAACTTGTTGAGAGGAATTCTGCCAAATGAAACTTCTCAATTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGAGGGCTTCCTTCCACCAATTTTGGGAACATATCCAGAACTCGATGAGATTGATCTTAGCCTCAACCAGCTTTCTGGGTTTCTCCTACCAAGCTTTTTCACCTCAACCAAATTGATTAATGTTAATCTCTCCAACAATAAATTTTCTGGATCAATTCCTATTCAATTTCAACCTCCAAATAATCCATTACTTTCTGCTGAAAATTTTAGTCTAGTGTCTCTTGATCTTTCACAAAACAACTTGAGTGGGAGTCTTCCTTCAAATATGAATAGGCTTCACAATTTGGCATATCTCAATCTATGCAATAACAATTTGGAAGGTTCTATTCCTTACGACCTTCCAGGTCAGCTGAGAGTATTGAATGTGTCCTTTAATAATCTTTCTGGTGTTGTACCTGAAAACTTAAAGCAGTTTCCTGAATCAGCATTTCATCCAGGAAATACTATGCTGGTATTTCCACATTCACAATCATCACCAGAAAATTCTTCCAACCTAGGTTTTAGGGAACATCGGTTACATAAAAAGTCTGCAACTAGGATTGCTCTGATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGTTTTTGTGGGTATAATAATTTATTATAAGGTTCATCGTGAAAAAGAAATAACTCCTAAACAAAGTGAAGCAAGAGGTATCACCCAAGAGAGGATTTTCACATCAAATGTAGAGGCACCATACAGAAATTTGGAAGCATTACCACGGCCTTCTGTTGATGCAAGAAACATTCATGCAGTGGGAAAGAAGCCAACAGATCTTGGCCCTTGTGAATTAGGTAAGAACGAGGAAGGAATGTCTTCCCCAATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCTAAGAGCTATCAGTTTGAGAATCCTGGTTCCCTCAAAGTCTCCTCTCCAGATAAACTGGTTGGTGACTTGCATATATTTGACGGATCCTTGGTGCTAACTGTGGAAGAACTTTCGTGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGCCATGGAACACTGTACAAAGCTGCACTTGACTCTGGTCATGCATTGGCTGTCAAATGGTTAAGGGAAGGAATAACTAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTTGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTACTTGGGGCCAAAGGAACATGAGAAACTGATTATATCAAATTACATGAATGCGCAATCTTTGGACATTTATCTCCATGAGGCTGATAAAAGAAATCTCCTTCCTTTGTCTCTGGATGAAAGGGTCAGAGTGGCTGTAGAGGTGGCACTGTGTCTTGTATTCCTACACGACGAGAAAGCCATACCTCATGGAAATCTCAAATCCACAAATATTTTGCTAGAAACTCCCAACAGAAATGTCCTCCTTACTGACTACAGCCTACACAGGATACTCACTCCGGCTGGTACTGCAGAGCAAGTGCTGAATGCGGGTGCACTTGGCTATCGGCCACCCGAGTTTGGTAGATCAAGCAAACCATGTCCTTCCTTGACAAGTGATGTCTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGGAATTCTGGAGAAATAGTTTCTGGGATTCCAGGGGTGGTTGACCTCACTGACTGGGTGAGGTTTTTGGCTGAGCAAGACCGTTCAAGCCAGTGTTTTGATAGGTCCCTATTGGACAAGCATAATGGAGAAAGACCATCTAAAATTCTTGATGACATGATAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTGACATGAAAGCTGTCTTTGATGATCTCTCAACAATAAGGTACAGTTGTTGATCATCTCATAAGCCTTAACCACTAACATCATCATCATCATCAATATCTCTAGTTGTTTTACATTTACTTTGTTAAAGTTACTTTTCAAATTTGTTGAATCTTTGTCCCTTCATGGCAGCTCTCCACGGGCATTATAACAAGTCGGGATATTAGATGAAATTCTTTATCAAAGGACATTCATTCTTTTCAACCCATCAATGGGCAGGTTGTATATTGATGATTTTTTATTTTTTTTTTTTTTATTCTTCCGTGTAATTAATCGATATTTCTAGATGTTAATCCACCACTTTGCCATCACTGCTATCTATGGAATAATGCTATGTTCCAAACCCACCGCATCTTTTATTGCCTATT 3649 0.3944 MQAIWLMLLLLVVIAFGNSDIDALLEFKKSIQNDPSGLVFNSWDSKSLDADGCPRKWYGILCSEGSVISISLDNAGLVGEFNFLAISGLVMLRNLSVVNNQFTGDLLHIATMESLEYLDLSLNKFNGPLVSNIVQLRKLIYLNLSSNELGGTLPSVFHKLGQLKYLDMHVNNFSGDIMRIFYQMGSLQYVDLSSNRFSGTPDLGLADESFLSSIQYLNISCNSLSGELFAHDGMPYLDNLEVFDASNNQLEGKIPSFTFVVSLRILRLACNQLTGLLPEALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNQLSGPLPLRIGRCAIVDFSNFSRIGYWGNYVEVVQLSTNLLRGILPNETSQFLRLTSLKVSNNSLEGFLPPILGTYPELDEIDLSLNQLSGFLLPSFFTSTKLINVNLSNNKFSGSIPIQFQPPNNPLLSAENFSLVSLDLSQNNLSGSLPSNMNRLHNLAYLNLCNNNLEGSIPYDLPGQLRVLNVSFNNLSGVVPENLKQFPESAFHPGNTMLVFPHSQSSPENSSNLGFREHRLHKKSATRIALIACLVAGAFVMVFVGIIIYYKVHREKEITPKQSEARGITQERIFTSNVEAPYRNLEALPRPSVDARNIHAVGKKPTDLGPCELGKNEEGMSSPMSILSPSNPSSSKSYQFENPGSLKVSSPDKLVGDLHIFDGSLVLTVEELSCAPAEVIGRSCHGTLYKAALDSGHALAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEADKRNLLPLSLDERVRVAVEVALCLVFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTPAGTAEQVLNAGALGYRPPEFGRSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSSQCFDRSLLDKHNGERPSKILDDMIKVALRCILPASDRPDMKAVFDDLSTIRYSC 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00834 996 SUPERFAMILY L domain-like 19 303 - -
Pste8g00834 996 FunFam Nuclear pore complex protein NUP107 17 179 - -
Pste8g00834 996 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Pste8g00834 996 FunFam Leucine-rich repeat receptor-like protein kinase 695 787 - -
Pste8g00834 996 MobiDBLite consensus disorder prediction 653 678 - -
Pste8g00834 996 SUPERFAMILY L domain-like 235 517 - -
Pste8g00834 996 SUPERFAMILY Protein kinase-like (PK-like) 713 989 IPR011009 -
Pste8g00834 996 Gene3D Transferase(Phosphotransferase) domain 1 789 995 - -
Pste8g00834 996 PANTHER OS07G0626500 PROTEIN 5 96 - -
Pste8g00834 996 SMART LRR_typ_2 260 283 IPR003591 -
Pste8g00834 996 SMART LRR_typ_2 136 159 IPR003591 -
Pste8g00834 996 SMART LRR_typ_2 184 207 IPR003591 -
Pste8g00834 996 SMART LRR_typ_2 476 500 IPR003591 -
Pste8g00834 996 Gene3D Ribonuclease Inhibitor 136 205 IPR032675 -
Pste8g00834 996 Gene3D Ribonuclease Inhibitor 19 135 IPR032675 -
Pste8g00834 996 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Pste8g00834 996 ProSiteProfiles Protein kinase domain profile. 710 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00834 996 Gene3D Ribonuclease Inhibitor 206 347 IPR032675 -
Pste8g00834 996 Gene3D Ribonuclease Inhibitor 348 448 IPR032675 -
Pste8g00834 996 Gene3D Ribonuclease Inhibitor 449 542 IPR032675 -
Pste8g00834 996 MobiDBLite consensus disorder prediction 657 678 - -
Pste8g00834 996 Gene3D Phosphorylase Kinase; domain 1 716 788 - -
Pste8g00834 996 Pfam Protein tyrosine and serine/threonine kinase 714 988 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00834 Pste-Chr8 4299126 4303975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00834 91 992 Receptor kinase-like Gene Family AT5G07280 28.466 6.06e-69 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g00834 PK_Tyr_Ser-Thr 7.2e-27 CL0016