Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00826 ACAGCAACAACGTATGAGTATGATGAGTATGAGCTGCAAAGGATGCAGAGTGCTGAGGAAAGGAAAGGGTGCAGCGAGACGTGCCCTCTGAGGTCGTGTCTGCAGTGGATACAATCTCCCGACTCACAAAGACATGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGTACACACCTATTCTCCTTCATTTCTTCAGTCCCCAAAACCAAACCACCTGCTTTGTTTCGGTCTCTGCTATTTGAAGGGTGCGGGCGAAGGGTAAATCCGGTGAACGGTGCAGTGGGACTTCTGTTGAGCGGAAACTGGCACGTGTGTGAGGCCGCTGTGGAGACGGTGCTGGCCGGAGGCGTTCTTCGTCCGTTGCCGGAAACATTTGCCGGAGATTCCAATAACACGCGCTATCATCATTTCCGGCCATTAACATCCATGCATCATATGAATGAGAACTCAAGTTTGATGAAGAGGCCACAAGAATCGGAGATGGCGAGTTACGGTGGACACCACAAAAATAAGATTTTAAATCTGTTCTAG 531 0.4991 TATTYEYDEYELQRMQSAEERKGCSETCPLRSCLQWIQSPDSQRHATLFLAKFFGRTHLFSFISSVPKTKPPALFRSLLFEGCGRRVNPVNGAVGLLLSGNWHVCEAAVETVLAGGVLRPLPETFAGDSNNTRYHHFRPLTSMHHMNENSSLMKRPQESEMASYGGHHKNKILNLF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00826 176 ProSiteProfiles LOB domain profile. 12 118 IPR004883 -
Pste8g00826 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 21 147 - -
Pste8g00826 176 Pfam Lateral organ boundaries (LOB) domain 20 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00826 Pste-Chr8 4267222 4268277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00826 21 127 AS2 family AT3G49940 69.159 3.23e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste8g00826 LOB 2.5e-16 No_clan