Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00817 AACCGGTGAAGCTGGTTCACTCCTTGGCCACTATTAAAAAGAGTGAAGGGGCAGTAATAAAACCACACTGGACATCATTTGCATTTTATTTTCTCTGTTGATTTGCACCTTAGGGTTTGTGTTTGCCCTTGTGCTTGCTGTGTGATTCTGTCACCATTTTCTGGAGATGGCTTCTTTCGGGCCAAATGGAACTGAATGTGAGGATGCCTTGCCTCCGCCACCTCCTGTTGTCCCATCGGATGTTGTACCTGTCAAAGCAGAAATAGAAAAGAAAAAGCCTCTAAGGCTTCCAATAGCTAGGCGGGGCCTTGCTTCAAAAGGGATGAAGCTGCAACTGCTCACCAATCACTACAGAGTGAATGTTGCAAACACTGATGGGCATTTTTATCAGTATAGTGTAGCTCTTTCTTATGAAGATGGACGACCTGTGGAGGGTAAGGGAGTAGGAAGGAAGCTTCTGGACAGGGTGCATGAAACATATGATTCTGAGTTGAATGGGAAGGATTTTGCTTATGACGGTGAGAAGACCCTGTTCACTCTTGGGTCTCTTGCTCGCAACAAGCTGGAGTTTACTGTTGTTCTGGAGGATGTTATTTCAAGCAGAAATAATGGAAATTGCAGTCCTGATGGAAATGGAGAATCACATGAGAGTGATAAGAAAAGGATTAGGCGCCCTAATAGGTCTAAGACTTTTAAAGTTGAGCTTAGCTTTGCCTCGAAGATTCCATTGCAGGCCATTGCCAGTGCTCTACGTGGACAGGAAACTGAGAATTATCAAGAAGCAATAAGAGTGCTTGATATCATTTTGAGGCAACATGCTGCTCAACAGGGCTGTTTGCTTGTGCGCCAATCTTTCTTCCACAATGATCCTAAAAATTTTGCTGATGTAGGAGGAGGTGTACTTGGTTGCAGGGGATTCCACTCCAGCTTTAGAACTACTCAAAGTGGACTGTCTTTGAACATAGATGTCTCGACCACAATGATTATTACCCCTGGGCCTGTGGTGGACTTCTTGATATCCAATCAAAACGTGAGAGACCCCTTTTCACTTGACTGGGTAAAGGCCAAGAGGACTTTAAAAAACCTGAGGATTAAAACGAGCCCTTCTAATCAGGAATTCAAAATCACTGGGCTCAGTGAACTCCCTTGTAAAGAGCAAACATTTACATTGAAGAAAAAAGGTGGCCTGAATGGTGAGGATGCTACTGAAGAAGAAGTGACAGTATATGATTATTTTGTTACTCACCGCAAGATAGATCTTAGGTATTCTGGAGATCTACCCTGTATCAATGTTGGGAAGCCCAAACGCCCAACTTATATCCCTCTGGAGCTTTGCTCATTGGTATCTCTTCAACGTTATACAAAAGCATTATCCACACTTCAACGGGCTTCATTGGTGGAGAAGTCCAGGCAGAAGCCTCAGGAGAGGATGAGGGTCTTGTCTGATGCACTTAAAAGTAGCAATTATGGTGCTGAACCAATGCTACGCAATTGTGGGATTTCTATTAGCACTAGCTTTACTGAAGTTGAGGGTCGGGTTTTACAGGCTCCAAGGTTAAAGTTTGGTAATGGGGAGGACTTCAACCCAAGGAATGGGAGATGGAATTTCAACAATAAGAAAATTGTTAAGCCTATCAAAATAGATAGATGGGCTGTGGTTAACTTCTCTGCCCGTTGTGATATACGGGGGCTTGTGAGGGATCTTATCAAGTGTGGCCAAATGAAAGGAATTGTGATCGACCAGCCATTTGATGTATTTGAAGAAAATGGCCAGTTTCGACGTGCCCCAGCAGTGGTTCGTGTAGAAAAAATGTTTGAGTTAGTTCAGTCTAAACTGCCTGGTGCCCCTCAGTTCCTTCTTTGTCTTCTTCCTGAAAGGAAAAATTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCTGAGTTTGGAATTGTGACTCAATGCATAGCTCCAACAAGGGTCAATGATCAATATTTAACTAATGTTTTGTTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCCCTGTTAGGTGTTGAGCACTCCCCCTCCATTCCTGTTGTGTCTAGAACACCAACAATCATTATTGGAATGGACGTGTCTCATGGTTCACCAGGTCAAACGGACATTCCTTCAATTGCAGCGGTGGTCAGCTCTCGGGAATGGCCTCTAATATCAAAGTACAGGGCATGTGTCCGAACTCAGTCACCCAAAGTAGAAATGATTGACAATCTTTTCAAGAAGGTGTCTGAAAAAGAGGACGAAGGCATAATGAGGGATGGTGTTTCTGAATCTCAGTTCAATCAGGTTTTAAACAAAGAACTTGATCAAATTATTGAGGCTTGCAAGTTTTTAGATGAAAAATGGAATCCCAAATTTTTGGTGATTGTTGCTCAAAAGAATCATCATACTAAATTTTTCCAGCCTGGATCTCCTGACAATGTTCCCCCTGGAACCGTAATTGATAACAAAATTTGCCATCCTCGGAATTATGATTTCTACTTGTGTGCGCATGCTGGAATGATAGGTACTAGCAGGCCTACACACTACCATGTTCTGTTGGATGAGATTGGATTTTCCCCTGATGATTTGCAAGAGCTTGTGCATTCTTTGTCATACGTGTATCAGAGGAGCACAACTGCTATTTCTGTCGTGGCTCCAATATGCTATGCTCACCTGGCTGCAACTCAGATGGGCCAGTTTATGAAATTTGAAGAAAAATCTGAGACATCTTCAAGTCATGGGGGTCTGCCTGCTCCTCCTGTCCCTCAGTTGCCTAGATTGCAGGAGAATGTCTCTAGTTCAATGTTCTTCTGTTGAGGCCATTGTTTTGTGACTAGTGATGAAACGATGCTCTGTTTATATAAATAGGAATGTAGTTTGTTTGGAAGACACTTGAACAATGTGCTCCGTAGGGTTTTTGAAAGAGATTATTTCACATGTATAAGCATTTATATGCCTTTACATGTGTGTAATCTTTTGCTAATTTTAAGTTTGTCAAAAACACAGTTGGTATTTTGTTGATGGTTTATGCATATTTCTCTAGGCTTTTCTATGCACTGTTATGTTTGCTTGAAAGTCAAAAGTTTGTTTGTGATCTACAATCGTGTTACTTGATGACAATTTAACCCGAAAGTTCAAAAAGTATTCCTAAAGATAAGTTAAATGCAAA 3176 0.4185 MASFGPNGTECEDALPPPPPVVPSDVVPVKAEIEKKKPLRLPIARRGLASKGMKLQLLTNHYRVNVANTDGHFYQYSVALSYEDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAYDGEKTLFTLGSLARNKLEFTVVLEDVISSRNNGNCSPDGNGESHESDKKRIRRPNRSKTFKVELSFASKIPLQAIASALRGQETENYQEAIRVLDIILRQHAAQQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIITPGPVVDFLISNQNVRDPFSLDWVKAKRTLKNLRIKTSPSNQEFKITGLSELPCKEQTFTLKKKGGLNGEDATEEEVTVYDYFVTHRKIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLSDALKSSNYGAEPMLRNCGISISTSFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVKPIKIDRWAVVNFSARCDIRGLVRDLIKCGQMKGIVIDQPFDVFEENGQFRRAPAVVRVEKMFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLGVEHSPSIPVVSRTPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSEKEDEGIMRDGVSESQFNQVLNKELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEEKSETSSSHGGLPAPPVPQLPRLQENVSSSMFFC 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00817 885 Gene3D - 630 885 IPR036397 GO:0003676
Pste8g00817 885 ProSiteProfiles Piwi domain profile. 563 849 IPR003165 GO:0003676
Pste8g00817 885 Pfam Piwi domain 564 849 IPR003165 GO:0003676
Pste8g00817 885 FunFam Protein argonaute 7 271 398 - -
Pste8g00817 885 MobiDBLite consensus disorder prediction 1 22 - -
Pste8g00817 885 MobiDBLite consensus disorder prediction 851 871 - -
Pste8g00817 885 SUPERFAMILY PAZ domain 271 434 IPR036085 GO:0005515
Pste8g00817 885 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 851 - -
Pste8g00817 885 SMART DUF1785_2 224 276 IPR014811 -
Pste8g00817 885 Pfam Argonaute linker 1 domain 226 274 IPR014811 -
Pste8g00817 885 CDD PAZ_argonaute_like 276 393 - -
Pste8g00817 885 ProSiteProfiles PAZ domain profile. 296 394 IPR003100 GO:0005515
Pste8g00817 885 SUPERFAMILY Ribonuclease H-like 547 847 IPR012337 -
Pste8g00817 885 Pfam N-terminal domain of argonaute 55 214 IPR032474 -
Pste8g00817 885 CDD Piwi_ago-like 438 843 IPR045246 -
Pste8g00817 885 Pfam Argonaute linker 2 domain 420 466 IPR032472 -
Pste8g00817 885 MobiDBLite consensus disorder prediction 148 170 - -
Pste8g00817 885 SMART Piwi_a_2 563 849 IPR003165 GO:0003676
Pste8g00817 885 Gene3D paz domain 270 398 - -
Pste8g00817 885 Pfam PAZ domain 280 410 IPR003100 GO:0005515
Pste8g00817 885 Coils Coil 714 734 - -
Pste8g00817 885 Gene3D - 458 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00817 Pste-Chr8 4221034 4229784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00817 45 885 Eukaryotic Initiation Factors Gene Family AT5G43810 33.407 5.50e-150 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00817 8 4221034 4229784 Pste8g00817 8 4221034 4229784 ECH