Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00797 TAACAACTTGCCTTTCATTGACTACGCTGTTTCCTTAGCCTTCTCTATCTAAGGCCATAAAGTGCCCATTTTCTTCTTAATTCTTCTTCCCACATACAAATACGTACTTCCAATTTGGAGATTAGTTCGTTTACATATCACTGTTGTTGTTGTTGTTGTTCTCCCCTGAGACACAAAAACTAAAGCACTTCCATAATGGGAAACTCCTGCAGAAAACCAGTGGCTCATGTGTCTTCCACAAGTTTCTTTGGAAGCACAAAGTCTCAAAATAAGACAAAAAAGAAGTCAAATCCTCCTGATGGGAAAGCTTCCTTAAAGACTTCTGAATCAGATGTTGACAAACCCATCTCCAATAACCTCAAGTCCTTCACCTGCAATGATTTAAAAGAGGCCACTAAGAGCTTCAGGCAAGAAAACTTAATTGGAGAAGGAGGGTTTGGGTTTGTCTACAAGGGATGGATAGATGAGAACACGTGTGCTCCCACAAAACCAGGGACTGGAATTGTGGTGGCCATCAAGAAGCTTAAACCTGAAAGTTTTCAAGGCCACAGGGAATGGCTGCAAGAAGTTAATTATCTAGGCCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTACTGCTCAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAGGGAAGTTTGGAAAATCATTTATTCAGAAAGGGTGTTCAACCAATTCCCTGGATTACACGGATCAACATTGCAATTGGAGTTGCAAGAGGATTAACATTTTTACATACCCTTGACGCAAATGTAATATATCGTGATTTAAAGGCTTCAAACATCCTACTTGATTCGGATTTCAAACCAAAGCTTTCGGATTTTGGGTTGGCAAGAGATGGTCCAACTGGAGATAATACTCACGTTTCTACCAGAGTTATTGGAACCCATGGTTATGCCGCACCAGAGTATGTAGCCACAGGTCATTTGACTCCAAGGAGTGATGTATACAGCTTTGGAGTTGTGTTGTTAGAGTTACTAACAGGAAGGCGAGTAGTGGAAGATGATAGACCTGGATTTTCAGAAGAAACACTTGTGGATTGGGCAAGGCCTTTCCTGAGTGATAGCAGAAGAATTTTGAGAATCATGGATACAAGGTTGGGAGGTCAATACTCCAAGAAAGGAGCACAAGCTGCAGGAGCACTTGTCCTACAATGTCTAAATAATGATCCCAAATATAGACCCACAATGGTTAATGTTTTAGCAGCCTTGGAATCACTACATTCCACAAATTCACTCCCAATCCCAAGGACCCCTAAATCTGCAACAAAGAATTCCAGTTCTAGTCTTTCCCACAAGTCACCTGCAAATACTAACAAACTATGACTATGTGGGCTAATGCTTCTTCTGCACCCCAACTAGTGCTTTCTTCTTCTAATTTTGCAATAACTTTCATTTTGGCCAAACCATTACCATGTGAAAAATATACTTTTTTTTTTTTATTCTTTTGAGGAGTTGAAAAGGGTATATATATTACAGAAATCAGAACTTGGTCGTGTAACTTTTGCACCGTTGGATTCATTGAATTTATCTACTGTGTAGAATCACATAATTTTTTCTTTCGTTACTTAACATGTCATTTCTCCAAATATTATCCTCCA 1637 0.3934 MGNSCRKPVAHVSSTSFFGSTKSQNKTKKKSNPPDGKASLKTSESDVDKPISNNLKSFTCNDLKEATKSFRQENLIGEGGFGFVYKGWIDENTCAPTKPGTGIVVAIKKLKPESFQGHREWLQEVNYLGQLHHENLVKLIGYCSDGKNRLLVYEFMQKGSLENHLFRKGVQPIPWITRINIAIGVARGLTFLHTLDANVIYRDLKASNILLDSDFKPKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEDDRPGFSEETLVDWARPFLSDSRRILRIMDTRLGGQYSKKGAQAAGALVLQCLNNDPKYRPTMVNVLAALESLHSTNSLPIPRTPKSATKNSSSSLSHKSPANTNKL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00797 388 CDD STKc_IRAK 76 354 - -
Pste8g00797 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pste8g00797 388 MobiDBLite consensus disorder prediction 1 48 - -
Pste8g00797 388 MobiDBLite consensus disorder prediction 8 27 - -
Pste8g00797 388 SUPERFAMILY Protein kinase-like (PK-like) 45 364 IPR011009 -
Pste8g00797 388 Gene3D Transferase(Phosphotransferase) domain 1 156 371 - -
Pste8g00797 388 FunFam Serine/threonine-protein kinase BIK1 37 155 - -
Pste8g00797 388 ProSiteProfiles Protein kinase domain profile. 70 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00797 388 PANTHER OS01G0588500 PROTEIN-RELATED 28 355 - -
Pste8g00797 388 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Pste8g00797 388 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00797 388 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 361 - -
Pste8g00797 388 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Pste8g00797 388 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00797 388 MobiDBLite consensus disorder prediction 359 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00797 Pste-Chr8 4076516 4082167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00797 6 351 Glycoside Hydrolase AT3G07070 47.727 4.43e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste8g00797 Pkinase 2.4e-48 CL0016