Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00782 TTGTGAGTTGTGAGTTGTGAGTTGTGAGTTGTGAGTTGTGAGAGTGTGCAGACTATAAATATAAAGTATTGAAGATTGAAAGAGAGCTCTTTCACTCTCACTCTTCAAAGTCACAAATGGCTGTCACCTTCTCAGATCTGCACACCGAAGAGGGCATCAAATCCCTGGATCAATTCCTTTCTGGGAAAACCTATGTCTCTGGTGATCAATTGACAAAGGATGACATCAAAGTGTATGCAGCTGTTGTCGGAAAGCCAGGAGACTCTTTTCCCAACGCCGCCAAGTGGTACCATGTTGTCTCTTCTCATCTGTTTCCCAGCTTCCCTGGCAACCCTCAAGGGGTAAGATTCAGTGGCAAACCTGCTCCAGCTGAAGCTGCACCTCACAAACCGGCTGCTGCTGAAGAAGATGATGACGATATTGATCTCTTTGGGGATGAGACAGAGGAGGATAAGAAGGCAGCTGAGGAAAGGGAGGCTGCTAAAAAGTCTGCCAAGAAAAAGGAAAGTAAGCTTTCTTCAGAGCCTCTTGACTGTGGAAAGTCTTCCGTCCTGCTAGATGTTAAACCTTGGGATGATGAAACTGACATGAAGAAACTGGAAGAGGCTGTCCGCAGTGTTGAGATGCCTGGTTTATTGTGGGGAGCATCCAAACTGGTTCCAGTGGGATATGGGATCAAGAAGTTGCAGATCATGTTGACCATCGTTGATGACCTTGTCTCTGTGGACTCTCTCATTGAGGAACATCTGACAGTTGAGCCATGCAACGAGTATATCCAAAGCTGTGACATTGTTGCATTCAACAAAATTTAAGTTTCCTTTGAGTGATTTTGTTTCAAAGATTGTGAGAAGTAAAAGAGATATATAGATAATCCGTGTTATGGTGTAACTCTGAATATTATTTCTTGAATTAGATTTTTGGGATTAAGATAACTGAACGATATGCCTCCATTTAAATTTTGATAAGTTTCTCAACACCCTCTAATTTAATGGAATGTTTGGTTTCTAG 1008 0.4246 MAVTFSDLHTEEGIKSLDQFLSGKTYVSGDQLTKDDIKVYAAVVGKPGDSFPNAAKWYHVVSSHLFPSFPGNPQGVRFSGKPAPAEAAPHKPAAAEEDDDDIDLFGDETEEDKKAAEEREAAKKSAKKKESKLSSEPLDCGKSSVLLDVKPWDDETDMKKLEEAVRSVEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTVEPCNEYIQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00782 231 CDD EF1B 141 231 IPR014038 GO:0003746|GO:0006414
Pste8g00782 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 98 106 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pste8g00782 231 MobiDBLite consensus disorder prediction 75 138 - -
Pste8g00782 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pste8g00782 231 MobiDBLite consensus disorder prediction 108 136 - -
Pste8g00782 231 Gene3D - 137 231 IPR014717 -
Pste8g00782 231 SUPERFAMILY eEF-1beta-like 141 231 IPR036219 -
Pste8g00782 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Pste8g00782 231 FunFam Elongation factor 1-beta 1 like 138 231 - -
Pste8g00782 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Pste8g00782 231 SUPERFAMILY GST C-terminal domain-like 10 63 IPR036282 -
Pste8g00782 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00782 Pste-Chr8 4017524 4020514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00782 1 231 Eukaryotic Initiation Factors Gene Family AT5G12110 71.186 7.13e-105 300