Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00781 CAGGAAAGAAGGCGAAGCAAGAGTACACAAAGAAAAGAAAACGAATGACTTTTGGGGTTGAAAGGAAAATCAATGGTAAAGGCTAGCATGAATAAAAGTCTCAATTCTCAAACATAGTGTTCAAAGGAAAAGGACATTCACTACTCTAACCCAACTCACTCTAAAACTGTTATCAAGAAGCTAGATGAGTTAAGGCTTTGCCTGGCAGCAATAGTGGAAGGGATGAAGCTTAAAAGGTGGCTCCTGAGCGTTTTGTTCCTCGTTGTCTCCACAGTGAGCAATGCAGTAGGTGCATTTGTCGGGGTAAACATTGGCACGGATGCTACTGATATTCCATCTGCTTCAAGTGTGGTTGCTATTCTAAAATTACATCAAATTACACACGTGCGTCTGTATAATGCCAATGAGCACATGCTACAAGCCCTTTCAAACACTGGCATTGAAGTGATTGTTGGAGTTACAGATGAAGAGATATTAGGCATTGGAGAATCTGCATCAGTTGCTGCAGCCTGGATAAGTAAGAATGTGGCTGCATACATGCCATCAACTAACATCACAGCAATAGCAGTTGGTAGTGAGGTTCTTACCTCAGTCCCAAATGTTGCACCTGTTCTGGTTCCTGCCATGAACCATCTTCACACAGCACTAGTTGCTTCAAACCTTAACTTTCGGGTTAAGGTTTCGACACCTCAGTCCATGGATGTAATTTCTAGGCCTTTTCCTCCTTCTACAGCCACCTTTAACTCTTCGTGGAACTCCACAATTTACCAACTCCTTCAGTTTTTGAAGAACACAAATTCCTCTTACATGTTAAATGCCTACCCTTATTATGGATACACTAAAGGAGATGGCATTTTCCCTATAGAATATGCACTATTCACACCCCTTTCTCCAGTGAAGCAAATTGTTGACCCAAACACACTATTCCATTACAACAGCATGTTTGAGGCTATGGTGGATGCTACCTACTATGCCATAGAATCTTTCAATTTCAATAACATACCTATTATTGTCACAGAAACTGGTTGGCCTAGTTTTGGTGCAGCAAATGAACCAGATGCCAGTGCAAAAAATGCTGAGGCCTACAATAATAATTTAATAATGAGAGTCCTCAATGGTTCAGGACCCCCTAGTCAGCCAAAGATAGCCATTAATACCTACCTATATGAATTGTTTAATGAGGACAAGAGGAAAGGTCCAATATCAGAAAAGAATTGGGGTGTTTTCTATGCTAATGGAAGTAGTATTTATTCATTGAGCTTTAGTGCTTCAAACCTGAGTAATGCAAATTCTCTAGGTTCATTTTGTGTGGCAAAAGATGATGCAGACACTGATAAATTGCAAGCTGGCTTGAATTGGGCTTGTGGACAAGGCCAAGCTAACTGTGTAGCTATTCAACCAGGGAGACCTTGCTATTCCCCCAATAACCTTAAAAGCCATGCCTCTTATGCTTATAATGATTATTTTCAAAAAATGCATAATGCTGGTGCAACATGTGACTTCGATGGTACAGCTACAACTACTACAGAGGATCCTAGTTATGGGTCCTGTATATATGCTGGAAGTGCCAACTCAAGCATTCGTGGAAGGAGTTCATCTTCTACAGCATATGGACTAGGGCCTGTAAGTCCTGTTGGAGCTGGTTTGAACCTGCAAGTGTCCCCACTCCAGTATTTGATATCGTTTATTAGTGTATTTTTTGCTATGCTGCTGTCATGAGACTCATGACCAAAAGGTCACAATTTTAGATTGCAATTTCATAAATTGCTTTTTTGGTCCATAGTTTTTGTTCAGATGGTGAATTTATGGTAGTAACAACATTTCTACTAGACTTTCTCCAACAACTCAGGCTCTTGCCCACGTAACCGCTTATTTTATTTAATTACATTATCAATTATA 1899 0.4018 MKLKRWLLSVLFLVVSTVSNAVGAFVGVNIGTDATDIPSASSVVAILKLHQITHVRLYNANEHMLQALSNTGIEVIVGVTDEEILGIGESASVAAAWISKNVAAYMPSTNITAIAVGSEVLTSVPNVAPVLVPAMNHLHTALVASNLNFRVKVSTPQSMDVISRPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFTPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIESFNFNNIPIIVTETGWPSFGAANEPDASAKNAEAYNNNLIMRVLNGSGPPSQPKIAINTYLYELFNEDKRKGPISEKNWGVFYANGSSIYSLSFSASNLSNANSLGSFCVAKDDADTDKLQAGLNWACGQGQANCVAIQPGRPCYSPNNLKSHASYAYNDYFQKMHNAGATCDFDGTATTTTEDPSYGSCIYAGSANSSIRGRSSSSTAYGLGPVSPVGAGLNLQVSPLQYLISFISVFFAMLLS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00781 498 SMART X8_cls 360 445 IPR012946 -
Pste8g00781 498 Pfam Glycosyl hydrolases family 17 26 347 IPR000490 GO:0004553|GO:0005975
Pste8g00781 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 434 IPR044965 GO:0004553|GO:0005975
Pste8g00781 498 FunFam Glucan endo-1,3-beta-glucosidase 3 25 350 - -
Pste8g00781 498 Gene3D - 355 456 - -
Pste8g00781 498 Gene3D Glycosidases 25 354 - -
Pste8g00781 498 FunFam Glucan endo-1,3-beta-glucosidase 4 355 449 - -
Pste8g00781 498 Pfam X8 domain 361 432 IPR012946 -
Pste8g00781 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Pste8g00781 498 SUPERFAMILY (Trans)glycosidases 26 347 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00781 Pste-Chr8 4013217 4016712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00781 1 479 Glycoside Hydrolase AT3G13560 63.750 0.0 644