Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00773 ATGGAAAAAGGTAAAGACGAGAAAACGAAGAAGAAGAACCAACCTGTGGTTTCGGAAATGGGAGCGTTGGTGATGATTATGGCGACGGAGGGATCGCTGCTTAATAGCGAAATGGCTAGGATTAAGAAAATTATGCAAACTGACGAGGATGTAGGAAAGATTGCAATGGCTGTGCCTCTTCTAGTTTCTAAAGCACTAGAGCTGTTTTTGCAAGATTTGTGTGATCGAACATATGAGATAACTTTGAGAAGGGGGGCAAAAACTATGAATGCTTTTCATTTAAAACAGTGCGTTCAGACTTTTAATGTGTTTGATTTTCTGAAAGATACTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGCTGCAACTGGTGATGACCATGCTGTAACTAAAAGGAGGAAAGTTGTTGGGGATGATGACAGTTACGACCACGAGGAGACGAAGAGAAATAACAAGCCAGAACCAGGACATACCAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGGGGTCGTGGCCGTGGAGTTAGAACTGTAGATCATGAGATGAGTTCACACGCCAAGTTTGAAGATGACTATGATGTATTGAAGCAAAATGAGAAGCATACTGAGAGCAATGAAAGCATGGAAAATGTTTCAGAACTTGAAGAGGATAGGCAGTCTTTTCCAGTAAGCAAAGCAGCCGAAGTGTTGATTCGAAAATTTGACTTAAATATGGAGCCAGACGAGGATATGGATTCATTCACCTCACCAACTTCTGTCCCAACTAGTTCATCTTCAAAACCAGTGTCAGAAGAGAAGCATGAGGAATACCCTGGATGGTCCTTGTTTGATATGGGGAAAATGACCATTGATCCCATTCAACTAGCTAACTTAAATGGAAAGATTGATGAAGATGAAGAGGATTATGATGAAGATACATAA 921 0.418 MEKGKDEKTKKKNQPVVSEMGALVMIMATEGSLLNSEMARIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNAFHLKQCVQTFNVFDFLKDTVSKVPDLGGSAATGDDHAVTKRRKVVGDDDSYDHEETKRNNKPEPGHTSGRGRGRGRGRGRGRGVRTVDHEMSSHAKFEDDYDVLKQNEKHTESNESMENVSELEEDRQSFPVSKAAEVLIRKFDLNMEPDEDMDSFTSPTSVPTSSSSKPVSEEKHEEYPGWSLFDMGKMTIDPIQLANLNGKIDEDEEDYDEDT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00773 306 MobiDBLite consensus disorder prediction 115 222 - -
Pste8g00773 306 MobiDBLite consensus disorder prediction 126 161 - -
Pste8g00773 306 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 98 IPR003958 -
Pste8g00773 306 SUPERFAMILY Histone-fold 45 115 IPR009072 GO:0046982
Pste8g00773 306 MobiDBLite consensus disorder prediction 240 271 - -
Pste8g00773 306 MobiDBLite consensus disorder prediction 244 260 - -
Pste8g00773 306 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 37 154 - -
Pste8g00773 306 Coils Coil 288 306 - -
Pste8g00773 306 FunFam dr1-associated corepressor homolog 33 113 - -
Pste8g00773 306 Gene3D Histone, subunit A 34 113 IPR009072 GO:0046982
Pste8g00773 306 MobiDBLite consensus disorder prediction 172 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00773 Pste-Chr8 3990114 4000091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00773 39 156 CCAAT-HAP5 Transcription Factor Family AT3G12480 62.097 3.91e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pste8g00773 CBFD_NFYB_HMF 1.5e-16 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00773 8 3990114 4000091 Pste8g00773 8 3990114 4000091 ECH