Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00769 ATGGGAGAGGTGGAAGTGATGCATTCTGAGCCTCTGCAGTTTGAGTGCAATGACATTAAACATATGACTGAGAAGGAAGTGTACTCTCCAGAATCAAATATGGAGCACTTGTCTGGAACAGAATCAATTCAATCAACTGACCAAAAAAATATCAATGATTTGCAAGAGAAAGGATATATGGAGTACGGATGTCAACATTATCGCAGAAGATGCCGTATCAGGGCACCCTGTTGCAATGAAATTTTTGATTGCCGCCATTGCCACAATGAAGCAAAAAATGATATCAACATTGACCAGAAGCATAGACATGACATTCCCCGACACCAAGTCAAACAGGTGATTTGTTCACTTTGTGGGACAGAACAAGAGGTGAGTTCAGAATTTCTTCAATCTCTTTCTGCGTGA 405 0.4074 MGEVEVMHSEPLQFECNDIKHMTEKEVYSPESNMEHLSGTESIQSTDQKNINDLQEKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAKNDINIDQKHRHDIPRHQVKQVICSLCGTEQEVSSEFLQSLSA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00769 134 SUPERFAMILY CHY zinc finger-like 61 125 IPR037274 GO:0008270
Pste8g00769 134 ProSiteProfiles Zinc finger CHY-type profile. 57 134 IPR008913 GO:0008270
Pste8g00769 134 Pfam CHY zinc finger 64 125 IPR008913 GO:0008270
Pste8g00769 134 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 31 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00769 Pste-Chr8 3977233 3978354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00769 62 125 C2H2 Transcription Factor Family AT3G18290 35.938 1.39e-10 55.8