Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00768 ATGCTTGAAAATACTTTTTTATTCAACAAAAAATCCATTATGTTGGATGAAATTTCATCATTTACAATCTGCATTGAATATCTGAAGCTAATTTTTTCTTGTGCTTATTTTACTGCTTCCAGGTTCATCAAAATTGTATGCATTGTGGTGTTTGTATGGGCAAGTACTTCTGTGGAACTTGCAAGCTTTTCGATGATGATATATCTAAGCAGCAGTACCATTGCAGTGGCTGTGGAATTTGCAGAACTGGAGGAAGCCAAAATTTCTTCCATTGCTACAAGTGTGGTAAGTTGTTGCTACTCGACTCTGTTGAAAAACAGTCACCCTTGTGTAGAAGGAGCAATGCATCATGATTGCCCTGTTTGTTTTGAGTATTTGTTTGAATCAAGAAATGATGTCACTGTTATGCCATGTGGACACACAATCCATAAGAGCTGCCTGAATGAAATGAGAGAACATTTCCAGTATGCATGCCCTCTCTGCTCAAAGTCTGTCTGCGACATGTCAAAGGTTTGGGAGAAATTTGACATAGAGATTGCTGCTACACCAATGCCTGAGCCATACCAAAATAAAATGTCAAGTATCATATTGCCTTATACTGTTGCTTTCAACAGGTTTGGATCTTGTGCAATGACTGTGGTAAAACTTCTCACGTTCAGTTCCATTTTGTGGCTCAAAAGTGCCCAAGCTGCAGATCATACAACACACGACAAACATGAGGCTGAGCAAGTGGCCACGATTATTCATTGGTTTCATCAAAAGCCTTCTCTTGAGTTATCTTGA 783 0.3895 MLENTFLFNKKSIMLDEISSFTICIEYLKLIFSCAYFTASRFIKIVCIVVFVWASTSVELASFSMMIYLSSSTIAVAVEFAELEEAKISSIATSVVSCCYSTLLKNSHPCVEGAMHHDCPVCFEYLFESRNDVTVMPCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEKFDIEIAATPMPEPYQNKMSSIILPYTVAFNRFGSCAMTVVKLLTFSSILWLKSAQAADHTTHDKHEAEQVATIIHWFHQKPSLELS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00768 260 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 96 195 - -
Pste8g00768 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 164 IPR013083 -
Pste8g00768 260 SMART ring_2 119 161 IPR001841 -
Pste8g00768 260 ProSiteProfiles Zinc finger RING-type profile. 119 162 IPR001841 -
Pste8g00768 260 Pfam Ring finger domain 118 161 IPR001841 -
Pste8g00768 260 SUPERFAMILY RING/U-box 118 168 - -
Pste8g00768 260 CDD RING-H2_Pirh2-like 118 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00768 Pste-Chr8 3974557 3976976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00768 97 196 C2H2 Transcription Factor Family AT3G18290 37.000 1.67e-16 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00768 8 3974557 3976976 Pste2g01924 2 19565877 19570988 PCT