Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00755 TTGAAACAAAGTATTTTCATTTTTGGCCCAAAGAGAGAAAGTTGCCACCAACACAGTGTTTGAATCCGCGGTGGCGACAACCCACGTAAACGGCGGAGGAGAGGCGCGGCACAGTCGTCTTCAGGGGTTTCTGTCGTCGTTGTTCTCTAGTCTCGGCGGTGTTTTTGGCTCAACGTTTCAAGAAACGCAGGAAACCATTAACATGGCTTCAAGAGCGGAACTACCCATCAATGTTGGTGAGAATAAGCAGAAAAACATGGGGGAAGGAAGAAATAGAAGGGTCCTTAGGGATATTGGGAATCTTGTGGCCAAACAAGGCCATGGAGTTGATGTGTCTAAGCCTGTCACTAGGAACTACTTTCGTACTCAGTTATTGGCCAATGCACAAGCCGCTGCAGCAAAGAAGAACAAGAAGTCAAGCACTGAAGTAGATAATGACACGGTGGTAGCAACTGATGGGGTTGTTGGTAGAAAAATTGTTGCTGCAAGAAAGGTGGGAGCAGCTAAGAAGGCTAAAGAAGAACCAGAAGTAATTGTGATTAGCTCTGACGATGAATCGGAAGAAAAGGAGAAGCAATCTGTTAAGGGAAAAAAGGCAAGGGAGAAGTCTGCTAGAAAAAATGCCAAGGCCTTTAGTTCAGTACTTTCTGCTAGAAGCAAGGATGCTTGTGGACTCCCAAGGGGTTTGGTAGTGAACATTGATGCAACTGAGATGGACAATGAATTGGCAGCAGCGGAGTATATTGATGATATCTATAAATTTTACAAAGAGACTGAAGAAGACGGCTGTGTGCAAGATTACATGGGTTCTCAGCCAGATATTAATGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATGGAAGTGCATATAAAATTTGAACTCATGCCAGAGACATTTTATTTGACCCTGAATATTGTTGATCGGTTCCTGTCTGTGAAGGCTGTACCTAGAAGGGAACTTCAGCTGGTTGGCATCAGCGCAATGCTGATAGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTTAAAGACTTCGTGTGCATATCTGATAACGCTTATGTTAGTCAACAAGTGTTGATGATGGAGAAAACAATCCTTAGGAAGCTTGAATGGTACTTAACAGTTCCGACACCCTATGTGTTTTTGGTTCGGTATATTAAAGCCTCCATTCCATCCGATAAAGAGATGGAACACATGGCGTTTTTCCTTGCTGAACTTTCTCTGATGCACTATTCTACTGTAATCTTGTACCGGCCTTCTCTAGTTGCTGCTTCTGCTGTATTTGCGGCTCGATGTACCCTTGAAAGGAGCCCTTCCTGGACAAGAACTTTGCAGCACTACACAGGCTACTCTGAAGAGCAACTAAGGGATTGCGCCAAAATCATGGTCAACCTTCATGCTGCTGCTCCAGGAAGTAAGCTTAGAGCAGTTTACAAGAAATTCTCTAGCTCAGATTTTTGTGCTGTGGCTCTTCTTTCTGCAGCGAAGAACTTGTCAGCACTGTCTTGAGCATTCTCTAGTTTAGGCTTGTCTAGGGTAGATCATGGCTTTTATGATCATGGCTTATAGCCTCCAGCAAAGTTTGATTCTTTTTGTGTAAAGCTTGAATAGAAATATTGCTTGGATTGCGTCTAATATGAATGTTGAGAGTGAGCGAGCTTTATTAATTCAATAACTTACATTTGCTTGTCATCTAATAT 1704 0.4313 MASRAELPINVGENKQKNMGEGRNRRVLRDIGNLVAKQGHGVDVSKPVTRNYFRTQLLANAQAAAAKKNKKSSTEVDNDTVVATDGVVGRKIVAARKVGAAKKAKEEPEVIVISSDDESEEKEKQSVKGKKAREKSARKNAKAFSSVLSARSKDACGLPRGLVVNIDATEMDNELAAAEYIDDIYKFYKETEEDGCVQDYMGSQPDINAKMRSILVDWLMEVHIKFELMPETFYLTLNIVDRFLSVKAVPRRELQLVGISAMLIASKYEEIWAPEVKDFVCISDNAYVSQQVLMMEKTILRKLEWYLTVPTPYVFLVRYIKASIPSDKEMEHMAFFLAELSLMHYSTVILYRPSLVAASAVFAARCTLERSPSWTRTLQHYTGYSEEQLRDCAKIMVNLHAAAPGSKLRAVYKKFSSSDFCAVALLSAAKNLSALS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00755 436 PIRSF Cyclin_A_B_D_E 2 436 IPR046965 GO:0016538|GO:0044772
Pste8g00755 436 Pfam Cyclin, N-terminal domain 183 307 IPR006671 -
Pste8g00755 436 Gene3D - 183 425 - -
Pste8g00755 436 PANTHER CYCLINS 128 417 IPR039361 -
Pste8g00755 436 SMART Cyclin_C_2 310 429 IPR004367 -
Pste8g00755 436 MobiDBLite consensus disorder prediction 115 135 - -
Pste8g00755 436 MobiDBLite consensus disorder prediction 115 130 - -
Pste8g00755 436 FunFam G2/mitotic-specific cyclin-1 298 424 - -
Pste8g00755 436 MobiDBLite consensus disorder prediction 1 24 - -
Pste8g00755 436 ProSitePatterns Cyclins signature. 212 243 IPR006671 -
Pste8g00755 436 SMART cyclin_7 314 398 IPR013763 -
Pste8g00755 436 SMART cyclin_7 217 301 IPR013763 -
Pste8g00755 436 Pfam Cyclin, C-terminal domain 310 427 IPR004367 -
Pste8g00755 436 SUPERFAMILY Cyclin-like 172 307 IPR036915 -
Pste8g00755 436 SUPERFAMILY Cyclin-like 311 431 IPR036915 -
Pste8g00755 436 CDD CYCLIN_AtCycB-like_rpt2 310 427 - -
Pste8g00755 436 CDD CYCLIN_AtCycB-like_rpt1 163 305 - -
Pste8g00755 436 Gene3D - 197 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00755 Pste-Chr8 3926132 3928424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00755 63 433 Core Cell Cycle Gene Families AT2G26760 53.989 7.16e-138 399