Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00753 GGAGCAGTGACTAGTTTAGTAATTGAGCGAAAAGGCAGGGCTTGATAAGCAGTTGATAGCTGGCAGCACAGGAATCCCACATTCTCATTCCCTTAAAGGAACTCATAAAAAAAGCCAAATTTGCAGTGCTTCCCACATCTTCACACTCCAAGAAGAATGAAACAGGGAAGCAGAAGCTGTGTTGATCCTATGTTGTCTTCTCTTCTCTTTCTTTTCTTCTGTCTTTCAGGATCTGCTCAGGCTTACAAGAATTACACAGTCGGAGACTCTTTAGGCTGGTTTGACAATACTGACAACTCCAATCTCAACTACCAGAAATGGGCTGACACTAAACAATTCAGCCTAGGAGATTTTCTCATTTTCAACACAGACACAAACCACTCAGTGGTTCAAACATACAATTTCACTACATACAGAGAATGTGACTATGATGATGCACTAGACAAGGACACAACCCAATGGTCAGCATCTGATCCATCGAACACCCAAACACATCCTGTGACAGTGGCAGTTCCTTTGGTGAAGGAAGGAATGACATACTTCTTTTCTGGTGATTATGATGGTGACCAATGCAAGAGTGGACAACATTTCAAGATAAATGTGACACATGGTCAAGGATTGCCAAAAAGTCTTAAAAGCCCAGAAGATGCCCCATCTCCTGCTAGTCCTATTGCTGGAGATGATGATTCAGCCCCCGACACTATTGTCCCTTCCAATTTCAGCCATCCCAAGGAAGAAGAAACTGACGATGACAAAGCTAGTGACAAACAAAAATCTACTTCTGCTTCAATCTCAGTGTATGCACAACTTCACGTTGTCTTATTAGGGATACTACTTTTCTTGTTTTAAATTAATACTTAAGATTTATTTTATATTATTTTTTAACTATAGATAAATGCTGCTGTTATTATTTATCTATTTTTTTCATTGGGTGTGAGTGTGAGTGAGACAGTGGGGTTTTGACTTTTGAGAGACTGAGATATACCGTAATTATTGTTGTAAACCAAAATAATGTAACAGTTACATCCTTTATTGCTTTATGAGTTGCAGTTTAG 1055 0.3915 MKQGSRSCVDPMLSSLLFLFFCLSGSAQAYKNYTVGDSLGWFDNTDNSNLNYQKWADTKQFSLGDFLIFNTDTNHSVVQTYNFTTYRECDYDDALDKDTTQWSASDPSNTQTHPVTVAVPLVKEGMTYFFSGDYDGDQCKSGQHFKINVTHGQGLPKSLKSPEDAPSPASPIAGDDDSAPDTIVPSNFSHPKEEETDDDKASDKQKSTSASISVYAQLHVVLLGILLFLF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00753 230 FunFam Early nodulin-like protein 18 30 152 - -
Pste8g00753 230 SUPERFAMILY Cupredoxins 31 149 IPR008972 -
Pste8g00753 230 Pfam Plastocyanin-like domain 41 143 IPR003245 GO:0009055
Pste8g00753 230 ProSiteProfiles Phytocyanin domain profile. 31 151 IPR003245 GO:0009055
Pste8g00753 230 Gene3D - 30 154 IPR008972 -
Pste8g00753 230 MobiDBLite consensus disorder prediction 188 205 - -
Pste8g00753 230 CDD Phytocyanin 31 149 - -
Pste8g00753 230 MobiDBLite consensus disorder prediction 152 207 - -
Pste8g00753 230 PANTHER BLUE COPPER PROTEIN 30 189 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00753 Pste-Chr8 3907203 3909628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00753 1 200 Phytocyanin Superfamily AT1G08500 63.235 6.03e-86 253