Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00737 ATGGCTTTCACACTAGACATGTGTGAAGATAGCATGATGTTCACTATGGAGTCTCAGAAGTCAGTGCCCGCTCCCTTCCTGACAAAGACATACCAACTTGTTGATGACCCTCGCACTGACCACATTGTGTCTTGGGGTGATGATGAAACTACATTTGTTGTGAGGAGGCCCCCAGAGTTTGCTAGAGATCTTCTTCCCAACTATTTCAAGCACAACAACTTCTCAAGCTTTGTTAGGCAGCTAAACACCTATGGTTTCAAGAAGGTAGCTGCTGATAGGTGGGAGTTTGCAAATGAGTACTTCAGAAAAGGAGCTAAGCACCTTCTATGCGAAATCCACAGGAGGAAAACCCCTCACCACTATCAACAACACTACAATATGCATGACCAACAACCACAGCTTCTTCAGCCAGATGAAAATCTGTGTTGGATTGATACTCCTCCATTACCATCTCCTAAACCAGGCACTGATATCTTAACAGCACTTTCTGAGGACAACCAAAGACTGAGGAGAAAGAACTTGATGCTAGTATCAGAACTCACTCACATGAAGAACCTATACAATGACATCATATATTTCATCCAAAACCATGTAAGTCCTGCTTCCTATGAACAAAGAAACGGCAGTGCTATTCTAAAGCTTGTAGAATTGGACTCATCACCAAATGTTATTAAACAAGCTAAGAGTCGTATTATGGACAAGTCTTTGGTAGCTTCAAGTGAGGAGCCAAATAGTTCTGTGAAGCTCTTTGGGGTTCCACTTTGTGGCAAAAAGAGATTGCACCCGGGTAACCTTGATAAACTAGAATAG 810 0.4247 MAFTLDMCEDSMMFTMESQKSVPAPFLTKTYQLVDDPRTDHIVSWGDDETTFVVRRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVAADRWEFANEYFRKGAKHLLCEIHRRKTPHHYQQHYNMHDQQPQLLQPDENLCWIDTPPLPSPKPGTDILTALSEDNQRLRRKNLMLVSELTHMKNLYNDIIYFIQNHVSPASYEQRNGSAILKLVELDSSPNVIKQAKSRIMDKSLVASSEEPNSSVKLFGVPLCGKKRLHPGNLDKLE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00737 269 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Pste8g00737 269 FunFam Heat stress transcription factor B-4 18 116 - -
Pste8g00737 269 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00737 269 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00737 269 Gene3D - 18 117 IPR036388 -
Pste8g00737 269 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00737 269 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00737 269 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00737 269 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 207 IPR027725 -
Pste8g00737 269 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00737 Pste-Chr8 3826262 3827459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00737 20 261 HSF AT1G46264 50.000 1.20e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste8g00737 HSF_DNA-bind 2e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00737 8 3826262 3827459 Pste8g00737 8 3826262 3827459 ECH