Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00713 ATCTTTGCCAAGACATCAACTCCCAAAAAAACAAAACAAAACCAGTCCGGTTTCCAGTTTCAGCTTAGCTTTAAGGTGTCAAGCATATCTTCTATTTCTACTTCAACTCAGCTCTCTCTGCACCCACATGAGATGTGCCTTCCCTTTCCAAAGGGAGCAGCAACAACTTGTGTACTACTCTTATTGTTGTTGTTGTCCATTTCTCAAGAAGAGATGCCCCGTCACCGCTTCTTAATGCCTACTATCATTATTGTTGTCTAGTTCTTGTGCTGCTTTTTTCTTCTCTTTTATGGATCTTGGGCTGGTGGGTTTGGAGGGGTTGGTGGGTTCAGACAGTGCCTCCTTTACTTCTTCTGTTGCTACAGATCCTGAGACAAAGCACAAGTGGTGCGGATCTGGGGTGCTTAAGCAAGAGAGATCTAGCATAACTAGTGAAGATGAATGGAGGACTTCAAAAGTGGCCAAAACTGATGACATGTCTGCTGCCTCCAAAGCAATGTTTTTTCACCAAAGAAACTCTTTCCTGAGATCCAATGCTACTCTTTTTTCTGATGCTCATCACCAATCACAAATCTTGAGCTTCTCTTCTCCAAAATCAGAACCTTTGTTGGTAGATAAGGCCTCCCCAAATGCCACATTGCCTTTTTCTTACCATCAGTTGTCTAGTTACTGCAGAAATACAGGTTACAATTCGGGAAGCATAAGCATGCATGAGGCTTTGGCTGGTGTGAGAGGGCCATTCACTCCATCGCAATGGATGGAGCTTGAACACCAAGCGTTGATCTACAAATACATCACATCAAATGTGCCTGTACCAACTCATCTTCTCATTCCAATTAGAAAAGCACTCGATTCTGCTGCCTTCTGCAACTTCTCAACTGGACTCCTCAGATCCAATCCATTGGGATGGGGAGGGTTCCATCTAGGATTCTCAAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGATGCTCAAGAGATGCCGTTGTTGATCAAAAGTATTGCGAGCGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACCACCACTCCTAATGCTTCCTCTAACTCCAATGTGGTCCCCTCCAACACCACCACCACCACCACCAACCCCTTTGCACACACCAATGTCATTCTGCACCACCCTCTTCCTCCTCATTCTTCTTCTCCATTCAACACCATCAGCAGGATGTTTATGAGTAACAAAGAGAACCACAACACGAATGAGAGGATGCAGGATGGCCATACACTTCCGATGCTGCCTCCCACCCTTGAGTTGAAACCAAAGGAAAACACCCCTTTCATTATTAATAAACAGCAAATCCCATATGATGAATCCTCAAGGAACAATGACTTTGGACTCGTCTCTTCTGATTCCTTGCTTAACCCTTCACAGAAAAAAAGCATTGCCTCTTCAGGAAAGAATGATTCTGAGTCCCAACAACGACATCCCCTCAGGCACTTCATGGATGAATCTCCCAAGCCACAGTCTCATCATCATCGTTCTTCTGTTTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCAATCTCCATTCCAATATCTTCCTCAGACTTCATGTCATTCACTACTTCCTCACCCTCCAATGAGAAATCCACATTGTCACCCCTGAGACTATCAAGGGAGTTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAATGGTGCTCCCAATGAGTCAAATACTAGGCCAGCCAATTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGACCTCTTGGAGAGGTTTTGAACCTTAGTAGTATTACTAACAACTGCATTGCAAGTGAAAAATGCGGAAAGAACACTTCTGCTCTCAACCTCATGAAAGATGGGTGGGACAACAGTCCTTCACTAGGGTCATCCCCAACTGGGGTGTTGCAAAAGACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGGGCAGAGAACAACAAAGAAGGTGCCACCTTGTGCAATGCCTTGTAA 2071 0.4553 MDLGLVGLEGLVGSDSASFTSSVATDPETKHKWCGSGVLKQERSSITSEDEWRTSKVAKTDDMSAASKAMFFHQRNSFLRSNATLFSDAHHQSQILSFSSPKSEPLLVDKASPNATLPFSYHQLSSYCRNTGYNSGSISMHEALAGVRGPFTPSQWMELEHQALIYKYITSNVPVPTHLLIPIRKALDSAAFCNFSTGLLRSNPLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTPNASSNSNVVPSNTTTTTTNPFAHTNVILHHPLPPHSSSPFNTISRMFMSNKENHNTNERMQDGHTLPMLPPTLELKPKENTPFIINKQQIPYDESSRNNDFGLVSSDSLLNPSQKKSIASSGKNDSESQQRHPLRHFMDESPKPQSHHHRSSVWPELDNMQSDRTQLSISIPISSSDFMSFTTSSPSNEKSTLSPLRLSRELDPIQMGLGVGNGAPNESNTRPANWIPITWESSMGGPLGEVLNLSSITNNCIASEKCGKNTSALNLMKDGWDNSPSLGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKEGATLCNAL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00713 593 SMART QLQ_2 149 185 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g00713 593 MobiDBLite consensus disorder prediction 567 584 - -
Pste8g00713 593 MobiDBLite consensus disorder prediction 364 402 - -
Pste8g00713 593 Pfam QLQ 150 184 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g00713 593 ProSiteProfiles QLQ domain profile. 150 185 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g00713 593 Pfam WRC 220 262 IPR014977 -
Pste8g00713 593 ProSiteProfiles WRC domain profile. 219 263 IPR014977 -
Pste8g00713 593 MobiDBLite consensus disorder prediction 264 293 - -
Pste8g00713 593 MobiDBLite consensus disorder prediction 567 587 - -
Pste8g00713 593 PANTHER GROWTH-REGULATING FACTOR 5 115 459 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste8g00713 593 MobiDBLite consensus disorder prediction 248 293 - -
Pste8g00713 593 MobiDBLite consensus disorder prediction 364 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00713 Pste-Chr8 3738471 3742949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00713 40 567 GRF Transcription Factor Family AT2G22840 42.518 1.67e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste8g00713 WRC 5.5e-21 No_clan