Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00691 GTGAACGTTCCAAAGACAAAGAAGACCTACTGCAAGAGCAAGGAGTGCAAGAAGCACACCCTTCACAAGGTTACCCAATACAAGAAGGGCAAGGACAGCATCGCCGCTCAGGGAAAACGCCGTTATGACCGCAAACAATCAGGTTACGGTGGTCAGACCAAGCCCGTTTTCCACAAAAAGGCCAAAACCACCAAGAAGATTGTGTTGAGGCTCCAGTGCCAGAGTTGCAAACATGTCTCTCAGCACCCAATCAAGAGGTGCAAGCACTTTGAGATCGGTGGTGACAAGAAGGGAAAAGGAACCTCTCTCTTCTAG 315 0.4952 VNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00691 104 SUPERFAMILY Zn-binding ribosomal proteins 1 93 IPR011332 GO:0006412
Pste8g00691 104 ProSitePatterns Ribosomal protein L44e signature. 62 73 IPR000552 GO:0003735|GO:0005840|GO:0006412
Pste8g00691 104 Gene3D - 1 104 - -
Pste8g00691 104 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 1 104 IPR000552 GO:0003735|GO:0005840|GO:0006412
Pste8g00691 104 MobiDBLite consensus disorder prediction 27 47 - -
Pste8g00691 104 MobiDBLite consensus disorder prediction 27 56 - -
Pste8g00691 104 FunFam 60S ribosomal protein L44 1 104 - -
Pste8g00691 104 Pfam Ribosomal protein L44 18 93 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00691 Pste-Chr8 3629094 3629583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00691 1 104 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 94.231 3.76e-68 197