Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00685 GAGATACCACAATATACACTACAAGATGATTCATTGCATCAAGTCAAAAAGAAAATATATTCATATTGTGATATCCTTAGAATCACCAACATTTTGAGTACAATTGTTGGTAAGGGTGGGTTTAGAACAGTTTATCTAGGTTATATTGATGACATTCCAGTTGCAGTGAAAATGCTTTCCCCATCATCTACTTGTGGGCATCAACAATTTGAAGCAAAGGTTAAACTTTTAGTAGGAGTTTATCATAAAAATATCACCTCCATTATTGGTTATTGTAACAAAACAACCAATAAAGGTCTCATATATGAGTATATGGCTAACAGAAACTTACATGAACATCTTTCTGGTAAACACAATAAATCAAAATTATTGACTTGGGAAATCAGACTTCAAATAGTGTTGAATGAATCATTAGGTGAGAAAGTAAACTTTCAAAAGTTAAAGTTGTGTTTTGTTAAACTCTTTATTTCCCGTTTCAATGTTTTGGTAATAAATCTAATCATAGGATTGGAGTACTTGCAAAATGGTTGCAAGGATCCTATGATCCACAAAGATATAAAATCTACAAATATCTTGTTGAATGAAAACTTGCAAGCAAAATTATGTGATTTTGGTCTTTCCAAAGTTATTCCAATTGAGGGTTACCACATATCTAATAGATTAACACAAAAAAGTGATGTTTATAGTTTTGTAGTTGTTCTTTTGGAAGTAATCACAAGTCAACCAGTAATAGCAAAGAATTTAGAAAAGACCCACATAATTGAATGGGTAAGATCCTTAATTGAGATGGGAGATATTAAGGGCATTGTTGACTCAAGATTAGAAGGAGATTTTGATATTAACTCAGCTTGGAAAGCGGTAGAAATAGCAATGACTTGTGTTTCTCCAAATCCCAACAAAAGACCAATGATGAATGTGGTGGTACTTGAATTAAGTGAGGCTTTAACCCTCGAATTAAACAACATAGTGGAGTGGATGCAATTCAATAACTTCAGT 996 0.3223 EIPQYTLQDDSLHQVKKKIYSYCDILRITNILSTIVGKGGFRTVYLGYIDDIPVAVKMLSPSSTCGHQQFEAKVKLLVGVYHKNITSIIGYCNKTTNKGLIYEYMANRNLHEHLSGKHNKSKLLTWEIRLQIVLNESLGEKVNFQKLKLCFVKLFISRFNVLVINLIIGLEYLQNGCKDPMIHKDIKSTNILLNENLQAKLCDFGLSKVIPIEGYHISNRLTQKSDVYSFVVVLLEVITSQPVIAKNLEKTHIIEWVRSLIEMGDIKGIVDSRLEGDFDINSAWKAVEIAMTCVSPNPNKRPMMNVVVLELSEALTLELNNIVEWMQFNNFS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00685 332 Gene3D Transferase(Phosphotransferase) domain 1 151 215 - -
Pste8g00685 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Pste8g00685 332 Gene3D Transferase(Phosphotransferase) domain 1 13 136 - -
Pste8g00685 332 ProSiteProfiles Protein kinase domain profile. 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00685 332 Gene3D Transferase(Phosphotransferase) domain 1 216 325 - -
Pste8g00685 332 Pfam Protein tyrosine and serine/threonine kinase 34 210 IPR001245 GO:0004672|GO:0006468
Pste8g00685 332 SMART serkin_6 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00685 332 PANTHER OS07G0107800 PROTEIN-RELATED 15 315 - -
Pste8g00685 332 SUPERFAMILY Protein kinase-like (PK-like) 17 309 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00685 Pste-Chr8 3571716 3573059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00685 15 319 Receptor kinase-like Gene Family AT1G51890 43.963 3.60e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste8g00685 PK_Tyr_Ser-Thr 4.5e-23 CL0016