Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00657 CTGACTTGGGGTTGTAATTAAAGAGTGGAAGGTTGCCCCAATCAATCAAAAAGCTCAAAGCAGGAACACCAAAACCAAAAAGGCAACATGGGCAGGGCTCCTTGCTGCGACAAAGCAAACGTGAAGAAGGGTCCATGGTCACCAGAAGAAGATGCTAAGCTCAAATCCTACATAGAAAAACATGGCACTGGTGGTAACTGGATTGCTTTGCCTCAAAAAATAGGGCTTAAGCGTTGTGGCAAGAGTTGTCGCCTTAGGTGGCTGAACTATCTTCGCCCTAATCTCAAGCATGGTGGCTTCTCGGAAGAAGAAGACAACATTATTTGCAGCCTTTACATCAGTATTGGAAGCAGGTGGTCGGTAATTGCAGCTCAATTGCCAGGAAGAACGGACAATGACATAAAGAACTACTGGAACACGAGGCTGAAAAAGAAGCTTCTGGGGAAGCACCGAAGAGAGCCACGTAATAGAGGGAATTACAATGTTAAGCAAGACAGTGATGTTAATAATAGAGGGAGTAGTACTGAAGGTGATTCTTCTTCCTTATCCTTGGTTCAGGAAAATACTAGCTCTACTCATCATCAACAACAACAACAACCATGTTGGTCACATAATATTCACATGCCTGTGTTACCACTACAAGTACCTTTGCCATATGCAAACCAAGGTCCATGTTTCAACGACCAAGATTCTATCAAAAAGCTCCTGATCAAGCTGGGAGGAAGATTTTCAGGTGATTATTACCCTCCTACCCTTGATGGGTTGAATCTTCAATTCTCATCAGATGAGCAACAAATTTATCAAGAACAAGTCCATGTTGGCTCTTCTTCTGCTTGCATTACCAGTGTTAACAACAATGATGTACAATTTACTCAAACTGGTCAATACCCTGGAGCTGATAATATTGTGCAAGGACAAGGTGGTAATTTCACTCCATCATTTGAGGAAATGGTGCCTTCTTCTAATTATCCAGATGGATTGGAGTTCTTGTATAATGAGGGCATTATCGACCATAAATTAATAGACTCTACTACTACCACCACCACAAATTGGGGTGAAACTAACACTCCCATTTATCATCATAATTCGCTTGCTTCCAATTACCAAGGTCAAGGTGTGAGGCAAGAATGTGCTTTGCATGAGTTTAGCTACCCGGGGGCACAATAACATGTTCTTGTACATTGTTATTTTTATTATTATTAACCGCTGCTACTAGCCATTTGTCACAAGGGGAGGGGGTCATTGATTATTAAAGACAATAAAATTAGTTAGATATATATAATATATATAACTAGCTATGTGTAGCTACATTAATTTCTGCCTAATTTAGTCTTTCACATAATGGCTAGTGTTTTTCTTTTTTTTTTAAGAGTCAT 1376 0.4012 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRREPRNRGNYNVKQDSDVNNRGSSTEGDSSSLSLVQENTSSTHHQQQQQPCWSHNIHMPVLPLQVPLPYANQGPCFNDQDSIKKLLIKLGGRFSGDYYPPTLDGLNLQFSSDEQQIYQEQVHVGSSSACITSVNNNDVQFTQTGQYPGADNIVQGQGGNFTPSFEEMVPSSNYPDGLEFLYNEGIIDHKLIDSTTTTTTNWGETNTPIYHHNSLASNYQGQGVRQECALHEFSYPGAQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00657 359 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pste8g00657 359 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pste8g00657 359 FunFam Transcription factor RAX3 7 68 - -
Pste8g00657 359 CDD SANT 71 113 IPR001005 -
Pste8g00657 359 SMART sant 67 115 IPR001005 -
Pste8g00657 359 SMART sant 13 64 IPR001005 -
Pste8g00657 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pste8g00657 359 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pste8g00657 359 Gene3D - 7 68 - -
Pste8g00657 359 PANTHER OS09G0431300 PROTEIN 1 257 - -
Pste8g00657 359 MobiDBLite consensus disorder prediction 119 171 - -
Pste8g00657 359 CDD SANT 16 62 IPR001005 -
Pste8g00657 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pste8g00657 359 FunFam Transcription factor MYB36 70 141 - -
Pste8g00657 359 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pste8g00657 359 Gene3D - 69 143 - -
Pste8g00657 359 MobiDBLite consensus disorder prediction 132 171 - -
Pste8g00657 359 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00657 Pste-Chr8 3441282 3443281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00657 1 209 MYB Transcription Factor Family AT3G49690 63.636 1.12e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste8g00657 Myb_DNA-binding 1.4e-14 CL0123