Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00656 ATGATATATTATTCCAACTGCACATCCTTAACTTATAAGCCAGTTATCCCAAAAATGGGAACTCCAACTCTTGGCCTTGTACTTGTTCTCCTTTTGTGCTTGGCTTGGCCTGCTTCTGTTTCTTCTCTTCCCATGTCTTTGAGAAGGCAAGCCTCTATCTTGGTTTCCCTCAAACAAGATTTTGAGGCCAACACCGATTCTTTGAGCAACTGGGACATGTCTAACTACATGTCTCTTTGCAGTACATGGGAGGGCATTGAGTGTGACCAAAAGAACAGGTCAGTTTTGTCATTGGACATATCCAACCTCAACCTTTCTGGCACACTTTCACCTGCCATCACAGGACTCAGGAGCCTTGTCAGTGTCTCACTTGCTGGGAATGTCTTTTCAGGAGGGTTCCCTAGTGATATTCACAAGCTAGCAGGGCTAAGATTCCTCAACATATCCATTAACAAATTCAGTGGAGACATGAGATGGGAATTTTCTCAGTTGAAAGAGCTTCAAGTGCTGGACGCTTATGACAATGAGTTCAATTGCTCCCTCCCTCTTGGTGTTACTCAGCTCCCCAAGCTCACTAGCTTGAATTTTGGCGGGAATTATTTCTATGGTGAAATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCAGGGAATGATTTGAGGGGTCTCATACCAACTGAGCTAGGGAATCTCACTAACCTGACACAGCTTTTCTTGGGATACTTCAATCAGTTTGACGGTGGAATCCCTCCTGAGTTTGGTAAGTTGGTTAATTTAGCTCATCTTGACCTTGCAAACTGTGGCTTGTCAGGTCCAATTCCAGCTGAGTTGGGAAATCTCAACAAACTAGACACTCTCTTTTTGCAAACTAACCAGCTCAGTGGCTCAATCCCTCCCCAATTAGGCAACATGAGTAGCCTGAAGTGTCTTGATCTATCAAACAATGAGCTAACAGGAGACATCCCCAATGAGTTCTCTAGCCTTCATGAGCTCACACTCTTGAATTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCTGATTTACCCAACTTGGAGGTTCTGAAGCTTTGGCAGAACAACTTCACGGGTGCTATTCCCTCAAAGCTTGGCCAGAATGGCAAATTAATTGAGCTTGACCTGTCAACAAACAAGCTCACTGGATTGGTGCCTAAATCTCTATGCCTTGGAAGGAGGCTGAGGATTTTGATCTTGCTCAACAATTTTCTGTTTGGATCTTTGCCTGCTGATCTTGGCCAATGCTACACACTCCAGAGAGTTCGGTTGGGTCAGAACTATTTGACAGGATCAATACCAAATGGCTTTCTTTACTTGCCTGAGCTGGCCCTTTTGGAATTGCAGAACAATTACCTTAGTGGTTGGCTTCCACAAGAAACAAGCACTGCACCTTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTATCTGGGTCTCTACCAACCTCTATTGGGAACTTTCCCAACTTGCAAATTCTGCTGCTTCATGGAAATAGACTCTCAGGAGAAATCCCTCCTGATATAGGGAGGTTGAAAAATATACTCAAGTTGGATATGAGTGTCAACAACTTTTCAGGCAGCATTCCTCCAGAGATAGGTAACAGCTTGTTGCTCACTTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATCCCAGTTCAGCTTTCTCAAATTCACATTATGAACTATCTTAATGTCTCATGGAACCACCTAAACCAAAGTCTTCCCAAGGAACTTGGGGCCATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCAGATGAGGGGCAATTCTCAGTATTTAACTCTACATCCTTCATGGGAAATCCTCAGCTCTGTGGATACGAGTTGAATCCTTGTAACCATTCTTCAAATGCAGTATTGGAGTCCCAAGACAGTGGCAGTGCAAGACCTAGAGTTCCTGGAAAGTATAAGCTTCTTTTTGCAGTGGCACTATTGGCTTGTTCGTTGGCATTTGCAACCTTGGCCTTTATCAAGAGCAGAAAGCAAAGGAGACAATCCAATTCATGGAAGCTCACAGCATTTCAAAATCTAGAATATGGTAGTGAAGACATCACAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGGGGTGGAGCTGGGGTTGTATACCATGGAACCATGCCAAATGGAGAGCAAGTAGCTGTTAAGAAGCTCTTGGGAATCAACAAAGGGTGTTCGCATGATAATGGCCTCTCTGCAGAAATAAGAACACTAGGAAGAATCAGGCACAGGTACATTGTGAGGTTGCTGGCTTTTTGTTCCAATAGAGAGACTAATTTACTTGTTTATGAGTACATGCCAAATGGAAGCTTAGGTGAAGTCTTGCATGGGAAGAGAGGAGAGTTTCTCAAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGGCTTTGCTATTTGCACCATGATTGCTCCCCTCTGATAATCCACAGAGATGTGAAGTCAAACAACATATTATTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGATTCTGGGACATCAGAGTGCATGTCTTCCATTGCTGGCTCTTATGGTTACATTGCTCCAGAATATGCATACACATTAAAAGTGGATGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTGCTGCTAGAACTACTAACGGGTAGAAGGCCAGTGGGGAATTTTGGTGAAGAAGGGCTAGACATTGTTCAATGGACCAAGCTTCAAACAAATTGGAGCAAAGAAAAAGTGGTGAAGATTCTTGATGAGAGGCTGTGTCACATTCCCTTAGATGAAGCGAAGCAGGTATACTTTGTGGCCATGCTATGTGTTCAGGAACAAAGTGTGGAAAGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAGCAACCAAATACGTTCCAAAAGCAGTGATCTACTACGTACCAAAGAACCAAAAGAAAAGATAAAGAACAAATAAAGAAAAAGCTGAGTCTATACATGTGCCTTGCATGTGTTAATGTTGTCGGTTGGTAAAGATGTCAATTTTCGTAACTAGTTTGTCATTGGAGTTATAAAGGGTTTTTTTTCTCTTTATTAACACTTAGCTGTGGGAACAAGAGACTTGCACACTGGAAAATTTACTATAGTTGGACAATGATGCTAAAGGGGGAAAGGGAATTAATGTTGATAGTAGCGCAGGAGTCTGTACAATACATGGGGATTGGAGTTAGATTCCTTTGCTTTCATTTACTACTTGCTTGTAATATTCTAGGAAATATTTATCGCCTGCATAATGAGATCTAGGAG 3387 0.4257 MIYYSNCTSLTYKPVIPKMGTPTLGLVLVLLLCLAWPASVSSLPMSLRRQASILVSLKQDFEANTDSLSNWDMSNYMSLCSTWEGIECDQKNRSVLSLDISNLNLSGTLSPAITGLRSLVSVSLAGNVFSGGFPSDIHKLAGLRFLNISINKFSGDMRWEFSQLKELQVLDAYDNEFNCSLPLGVTQLPKLTSLNFGGNYFYGEIPPSYGDMVQLNFLSLAGNDLRGLIPTELGNLTNLTQLFLGYFNQFDGGIPPEFGKLVNLAHLDLANCGLSGPIPAELGNLNKLDTLFLQTNQLSGSIPPQLGNMSSLKCLDLSNNELTGDIPNEFSSLHELTLLNLFINRLHGEIPPFIADLPNLEVLKLWQNNFTGAIPSKLGQNGKLIELDLSTNKLTGLVPKSLCLGRRLRILILLNNFLFGSLPADLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELALLELQNNYLSGWLPQETSTAPSKLGQLNLSNNRLSGSLPTSIGNFPNLQILLLHGNRLSGEIPPDIGRLKNILKLDMSVNNFSGSIPPEIGNSLLLTYLDLSQNQLSGPIPVQLSQIHIMNYLNVSWNHLNQSLPKELGAMKGLTSADFSHNDFSGSIPDEGQFSVFNSTSFMGNPQLCGYELNPCNHSSNAVLESQDSGSARPRVPGKYKLLFAVALLACSLAFATLAFIKSRKQRRQSNSWKLTAFQNLEYGSEDITGCIKESNVIGRGGAGVVYHGTMPNGEQVAVKKLLGINKGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDSGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGNFGEEGLDIVQWTKLQTNWSKEKVVKILDERLCHIPLDEAKQVYFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQKQ 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00656 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 161 248 - -
Pste8g00656 1003 FunFam leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X1 251 353 - -
Pste8g00656 1003 SUPERFAMILY Protein kinase-like (PK-like) 712 991 IPR011009 -
Pste8g00656 1003 ProSiteProfiles Protein kinase domain profile. 719 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00656 1003 Gene3D Ribonuclease Inhibitor 205 304 IPR032675 -
Pste8g00656 1003 Gene3D Ribonuclease Inhibitor 47 204 IPR032675 -
Pste8g00656 1003 SMART LRR_typ_2 309 332 IPR003591 -
Pste8g00656 1003 SMART LRR_typ_2 382 404 IPR003591 -
Pste8g00656 1003 SMART LRR_typ_2 453 477 IPR003591 -
Pste8g00656 1003 SMART LRR_typ_2 357 381 IPR003591 -
Pste8g00656 1003 SMART LRR_typ_2 285 308 IPR003591 -
Pste8g00656 1003 SMART LRR_typ_2 212 235 IPR003591 -
Pste8g00656 1003 SMART LRR_typ_2 502 526 IPR003591 -
Pste8g00656 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 49 160 - -
Pste8g00656 1003 SUPERFAMILY L domain-like 384 643 - -
Pste8g00656 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 361 647 - -
Pste8g00656 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 688 796 - -
Pste8g00656 1003 SMART serkin_6 719 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00656 1003 SUPERFAMILY RNI-like 97 419 - -
Pste8g00656 1003 Pfam Leucine rich repeat N-terminal domain 50 89 IPR013210 -
Pste8g00656 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 797 1003 - -
Pste8g00656 1003 Gene3D Ribonuclease Inhibitor 305 382 IPR032675 -
Pste8g00656 1003 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 214 993 - -
Pste8g00656 1003 Gene3D Transferase(Phosphotransferase) domain 1 797 1003 - -
Pste8g00656 1003 ProSiteProfiles Leucine-rich repeat profile. 311 333 IPR001611 GO:0005515
Pste8g00656 1003 Pfam Leucine Rich Repeat 311 333 IPR001611 GO:0005515
Pste8g00656 1003 Pfam Protein tyrosine and serine/threonine kinase 721 991 IPR001245 GO:0004672|GO:0006468
Pste8g00656 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Pste8g00656 1003 Gene3D Phosphorylase Kinase; domain 1 685 796 - -
Pste8g00656 1003 Gene3D Ribonuclease Inhibitor 383 647 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00656 Pste-Chr8 3433363 3437866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00656 40 993 Receptor kinase-like Gene Family AT5G65700 58.351 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste8g00656 PK_Tyr_Ser-Thr 3.1e-46 CL0016