Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00655 AATATCTTCTTCTCCATTTCCATTTTGCATTGCATAAAACCCTAAACCCAGAATCAGTGTGCAGGGTTTGTGTTTCCGTTTCCGCTTTTGTCACCACACCATGCTCACCGCGATCCTCAGAAGAACCTCTTCCACCCTCTCAAGGCGCCTTCTCCCCGCCGCCTTAGTCTCCGCTTCCACCGTCGCCGGCAACGACTTCCGGCCACTCGTCGCTGCCTTCAATTCCCGAACCTTCCACTCCAAACCCACCCCATTAAACTTCCGCTCCTCTTTATGTCACCGCGCGGAATACGCCATAGATGATATCCCTTACGAAGAAGGGTCCAACGAAGGTCTCGAGATTGCGAAGCTCGGCATTTCTGAAGATATTGTCTCTGCTTTGGCCAAGAAAGGCATAACCAAACTCTTCCCCATTCAGAGGGCTGTGCTGGAACCTGCTATGCAAGGTCGTGATATGATTGGTCGAGCTAGAACTGGAACTGGGAAAACCCTTGCTTTCGGGATACCCATCATGGATAAGATCATTCAGTTTAATGCTAAGCATGGGCGGGGGAGGGATCCTTTGGCTTTGGTTTTGGCTCCGACTAGAGAGCTTGCTCGACAGGTTGAAAAGGAGTTCTACGAGTCGGCTCCTAATTTGGATACGATTTGTGTTTATGGGGGTACACCCATCTCTCGGCAGATGAGGCAGCTTGATTATGGCGTTGATATTGCTGTGGGGACGCCCGGTCGGATTATTGACCTTCTCAACAGAGGTGCTCTAAATTTGAAGGATGTTCAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGCTTTCAGGAAGACGTGGAGAAGATCTTGGAGAGGTTGCCCCCAAAACGTCAGACTCTTATGTTCTCTGCAACAATGCCGTCTTGGATAAAGCAGATTTCACGCAATTATCTGAATGATGCCCTGACCGTTGATCTTGTTGGTGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTGTTCTCCATTGCAACCGATTTGTATGTTAAATCAGGAATTCTTGCAACTCTAATAACAGAACATGCAAAAGGGGGAAAGTGTATTGTTTTTACTCAAACAAAGCGTGATGCTGATCGATTATCATATACCATGGCAAAAAGTGTTCAATGTGAGGCTTTGCATGGAGACATATCACAAGCTCAAAGGGAAAAAACTCTTGCTGGCTTCAGAAATGGCCATTTCAATGTTTTAGTGGCAACTGATGTTGCCTCACGTGGGCTTGATATACCTAATGTTGACCTTGTAATACACTATGATCTTCCCAGTTCTTCAGAGATATTTGTTCATCGATCTGGACGAACAGGTCGTGCTGGTAAGAAAGGAACTGCCATTCTTGTGTATACAGAAGATCAATCAAGGGCTGTTAGGATTATTGAACGTGATGTGGGCTGTAGATTTACAGAGCTACCACGGATTGCTGTTGATAGTGCATCAATGGACACAGTTGGTATGGGTGGTGGGCGATTTGGTTCTTTTGGAGGTACAAGGGATCGTCGATATGGTGATACAGGTTTTGGCCGTGGTCCTGGATCTGGCCGTTCTGGGGGCTACAGTAACAGTGGATTTGGCCGCTCTAGCTTTGGAGATTCTGGGGAAAGGTTTGGTGGACAGAATTATAATCGATTTGGTGGCTCTGGTTTGAGTCAATCAGGAGGTGGGTTTTCTGGTAATTCATCTGGTGAAATAAATAAATATGGTGGATCAAGCCCTGGTCGTTTTGGCTCGTCTGGTGGGTTTGGTTCAGGTGGCTATGGTTCAGGTGAATCTGGAAGTAGATCTGGTCGATCATCCAGTGGGTCTAGGTTTAGTCGTCCAGATGATTTTGGGGGATTTGGTGGTTCAGATCGTTCGGGTGGTTTTGGAGATTTTGGCTCAGGTCAATCTAGTAATAAAAAAAGTAGAAGACCTTTTTAACTTGATAAATATAAAAAACGCACCATCTTATTTCTTGGTGGTTTAGTTCTTGTAGAGAGTTTGTTTCTTTTGATTTCCTCTAAAACTTAGAGGCATCTTGGCTAATCTTTGTATCACTAAGGATTTGAGAAGGTCATATAGCTAAGAATCAAATTCTCCGGGCAGTGGATTATCTTTTTCTGGTACTCTTTTCTCAGCCTCAGCTGTTTTTTTAAACATTTATAAAAACTAAAAGAGGAGAATATTACAGGAATTCCATCATCTGCCTTGAATTTGTTTTGCTCGTTATTACCTTCTCTCTATGGCATTGAATCACATACATCACCATCATGAAAATGCGTGTACTTTATGCGCGGGTAGTTTTGAAGAGGCAGCTGTATGGAGTGTGGTGATTCAATTTATTTAATGTATTTATATTTATCTTCCTTAAAGTAGTGGTTAAGGGCAGATAAAATATCTTAGGTAGTTGTAGGGTGCTCTACTGTTTTGTTTTATACTTAAATCTATTGTGCA 2467 0.4366 MLTAILRRTSSTLSRRLLPAALVSASTVAGNDFRPLVAAFNSRTFHSKPTPLNFRSSLCHRAEYAIDDIPYEEGSNEGLEIAKLGISEDIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRDPLALVLAPTRELARQVEKEFYESAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQISRNYLNDALTVDLVGDSDQKLADGISLFSIATDLYVKSGILATLITEHAKGGKCIVFTQTKRDADRLSYTMAKSVQCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPSSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVRIIERDVGCRFTELPRIAVDSASMDTVGMGGGRFGSFGGTRDRRYGDTGFGRGPGSGRSGGYSNSGFGRSSFGDSGERFGGQNYNRFGGSGLSQSGGGFSGNSSGEINKYGGSSPGRFGSSGGFGSGGYGSGESGSRSGRSSSGSRFSRPDDFGGFGGSDRSGGFGDFGSGQSSNKKSRRPF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00655 617 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 313 457 IPR001650 -
Pste8g00655 617 MobiDBLite consensus disorder prediction 521 545 - -
Pste8g00655 617 CDD SF2_C_DEAD 310 427 - -
Pste8g00655 617 SMART helicmild6 338 418 IPR001650 -
Pste8g00655 617 MobiDBLite consensus disorder prediction 465 617 - -
Pste8g00655 617 Pfam Helicase conserved C-terminal domain 313 418 IPR001650 -
Pste8g00655 617 SMART ultradead3 98 301 IPR014001 -
Pste8g00655 617 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 80 455 - -
Pste8g00655 617 FunFam ATP-dependent RNA helicase RhlE 72 287 - -
Pste8g00655 617 Gene3D - 303 460 IPR027417 -
Pste8g00655 617 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 110 284 IPR014001 -
Pste8g00655 617 Pfam DEAD/DEAH box helicase 103 272 IPR011545 GO:0003676|GO:0005524
Pste8g00655 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 439 IPR027417 -
Pste8g00655 617 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 79 107 IPR014014 GO:0003724
Pste8g00655 617 CDD DEADc 90 285 - -
Pste8g00655 617 MobiDBLite consensus disorder prediction 566 583 - -
Pste8g00655 617 MobiDBLite consensus disorder prediction 601 617 - -
Pste8g00655 617 Gene3D - 80 288 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00655 Pste-Chr8 3420109 3425043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00655 65 450 Eukaryotic Initiation Factors Gene Family AT3G19760 32.061 4.49e-66 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00999 7 9196016 9203756 Pste8g00655 8 3420109 3425043 PCT