Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste8g00655 | AATATCTTCTTCTCCATTTCCATTTTGCATTGCATAAAACCCTAAACCCAGAATCAGTGTGCAGGGTTTGTGTTTCCGTTTCCGCTTTTGTCACCACACCATGCTCACCGCGATCCTCAGAAGAACCTCTTCCACCCTCTCAAGGCGCCTTCTCCCCGCCGCCTTAGTCTCCGCTTCCACCGTCGCCGGCAACGACTTCCGGCCACTCGTCGCTGCCTTCAATTCCCGAACCTTCCACTCCAAACCCACCCCATTAAACTTCCGCTCCTCTTTATGTCACCGCGCGGAATACGCCATAGATGATATCCCTTACGAAGAAGGGTCCAACGAAGGTCTCGAGATTGCGAAGCTCGGCATTTCTGAAGATATTGTCTCTGCTTTGGCCAAGAAAGGCATAACCAAACTCTTCCCCATTCAGAGGGCTGTGCTGGAACCTGCTATGCAAGGTCGTGATATGATTGGTCGAGCTAGAACTGGAACTGGGAAAACCCTTGCTTTCGGGATACCCATCATGGATAAGATCATTCAGTTTAATGCTAAGCATGGGCGGGGGAGGGATCCTTTGGCTTTGGTTTTGGCTCCGACTAGAGAGCTTGCTCGACAGGTTGAAAAGGAGTTCTACGAGTCGGCTCCTAATTTGGATACGATTTGTGTTTATGGGGGTACACCCATCTCTCGGCAGATGAGGCAGCTTGATTATGGCGTTGATATTGCTGTGGGGACGCCCGGTCGGATTATTGACCTTCTCAACAGAGGTGCTCTAAATTTGAAGGATGTTCAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGCTTTCAGGAAGACGTGGAGAAGATCTTGGAGAGGTTGCCCCCAAAACGTCAGACTCTTATGTTCTCTGCAACAATGCCGTCTTGGATAAAGCAGATTTCACGCAATTATCTGAATGATGCCCTGACCGTTGATCTTGTTGGTGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTGTTCTCCATTGCAACCGATTTGTATGTTAAATCAGGAATTCTTGCAACTCTAATAACAGAACATGCAAAAGGGGGAAAGTGTATTGTTTTTACTCAAACAAAGCGTGATGCTGATCGATTATCATATACCATGGCAAAAAGTGTTCAATGTGAGGCTTTGCATGGAGACATATCACAAGCTCAAAGGGAAAAAACTCTTGCTGGCTTCAGAAATGGCCATTTCAATGTTTTAGTGGCAACTGATGTTGCCTCACGTGGGCTTGATATACCTAATGTTGACCTTGTAATACACTATGATCTTCCCAGTTCTTCAGAGATATTTGTTCATCGATCTGGACGAACAGGTCGTGCTGGTAAGAAAGGAACTGCCATTCTTGTGTATACAGAAGATCAATCAAGGGCTGTTAGGATTATTGAACGTGATGTGGGCTGTAGATTTACAGAGCTACCACGGATTGCTGTTGATAGTGCATCAATGGACACAGTTGGTATGGGTGGTGGGCGATTTGGTTCTTTTGGAGGTACAAGGGATCGTCGATATGGTGATACAGGTTTTGGCCGTGGTCCTGGATCTGGCCGTTCTGGGGGCTACAGTAACAGTGGATTTGGCCGCTCTAGCTTTGGAGATTCTGGGGAAAGGTTTGGTGGACAGAATTATAATCGATTTGGTGGCTCTGGTTTGAGTCAATCAGGAGGTGGGTTTTCTGGTAATTCATCTGGTGAAATAAATAAATATGGTGGATCAAGCCCTGGTCGTTTTGGCTCGTCTGGTGGGTTTGGTTCAGGTGGCTATGGTTCAGGTGAATCTGGAAGTAGATCTGGTCGATCATCCAGTGGGTCTAGGTTTAGTCGTCCAGATGATTTTGGGGGATTTGGTGGTTCAGATCGTTCGGGTGGTTTTGGAGATTTTGGCTCAGGTCAATCTAGTAATAAAAAAAGTAGAAGACCTTTTTAACTTGATAAATATAAAAAACGCACCATCTTATTTCTTGGTGGTTTAGTTCTTGTAGAGAGTTTGTTTCTTTTGATTTCCTCTAAAACTTAGAGGCATCTTGGCTAATCTTTGTATCACTAAGGATTTGAGAAGGTCATATAGCTAAGAATCAAATTCTCCGGGCAGTGGATTATCTTTTTCTGGTACTCTTTTCTCAGCCTCAGCTGTTTTTTTAAACATTTATAAAAACTAAAAGAGGAGAATATTACAGGAATTCCATCATCTGCCTTGAATTTGTTTTGCTCGTTATTACCTTCTCTCTATGGCATTGAATCACATACATCACCATCATGAAAATGCGTGTACTTTATGCGCGGGTAGTTTTGAAGAGGCAGCTGTATGGAGTGTGGTGATTCAATTTATTTAATGTATTTATATTTATCTTCCTTAAAGTAGTGGTTAAGGGCAGATAAAATATCTTAGGTAGTTGTAGGGTGCTCTACTGTTTTGTTTTATACTTAAATCTATTGTGCA | 2467 | 0.4366 | MLTAILRRTSSTLSRRLLPAALVSASTVAGNDFRPLVAAFNSRTFHSKPTPLNFRSSLCHRAEYAIDDIPYEEGSNEGLEIAKLGISEDIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRDPLALVLAPTRELARQVEKEFYESAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQISRNYLNDALTVDLVGDSDQKLADGISLFSIATDLYVKSGILATLITEHAKGGKCIVFTQTKRDADRLSYTMAKSVQCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPSSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVRIIERDVGCRFTELPRIAVDSASMDTVGMGGGRFGSFGGTRDRRYGDTGFGRGPGSGRSGGYSNSGFGRSSFGDSGERFGGQNYNRFGGSGLSQSGGGFSGNSSGEINKYGGSSPGRFGSSGGFGSGGYGSGESGSRSGRSSSGSRFSRPDDFGGFGGSDRSGGFGDFGSGQSSNKKSRRPF | 617 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste8g00655 | 617 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 313 | 457 | IPR001650 | - | |
Pste8g00655 | 617 | MobiDBLite | consensus disorder prediction | 521 | 545 | - | - | |
Pste8g00655 | 617 | CDD | SF2_C_DEAD | 310 | 427 | - | - | |
Pste8g00655 | 617 | SMART | helicmild6 | 338 | 418 | IPR001650 | - | |
Pste8g00655 | 617 | MobiDBLite | consensus disorder prediction | 465 | 617 | - | - | |
Pste8g00655 | 617 | Pfam | Helicase conserved C-terminal domain | 313 | 418 | IPR001650 | - | |
Pste8g00655 | 617 | SMART | ultradead3 | 98 | 301 | IPR014001 | - | |
Pste8g00655 | 617 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 80 | 455 | - | - | |
Pste8g00655 | 617 | FunFam | ATP-dependent RNA helicase RhlE | 72 | 287 | - | - | |
Pste8g00655 | 617 | Gene3D | - | 303 | 460 | IPR027417 | - | |
Pste8g00655 | 617 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 110 | 284 | IPR014001 | - | |
Pste8g00655 | 617 | Pfam | DEAD/DEAH box helicase | 103 | 272 | IPR011545 | GO:0003676|GO:0005524 | |
Pste8g00655 | 617 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 153 | 439 | IPR027417 | - | |
Pste8g00655 | 617 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 79 | 107 | IPR014014 | GO:0003724 | |
Pste8g00655 | 617 | CDD | DEADc | 90 | 285 | - | - | |
Pste8g00655 | 617 | MobiDBLite | consensus disorder prediction | 566 | 583 | - | - | |
Pste8g00655 | 617 | MobiDBLite | consensus disorder prediction | 601 | 617 | - | - | |
Pste8g00655 | 617 | Gene3D | - | 80 | 288 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste8g00655 | Pste-Chr8 | 3420109 | 3425043 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste8g00655 | 65 | 450 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 32.061 | 4.49e-66 | 220 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste7g00999 | 7 | 9196016 | 9203756 | Pste8g00655 | 8 | 3420109 | 3425043 | PCT |