Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00598 GAGAGAGGCAAAACCTGAAAAAGTGAAGAAAAGGGAGCACACAGAGAGGTTCACGGCTTCTCTTTCACATTCACATAACCAAACACCTCCTTAAAGCCTTCAAGCTTCAATCTTTTTCTCTTCTCTTCTGCTTCCTTTTTCCCCCTCTCTGCATTAATTTTCTTTGGACTTTTCCACTGATGCACCCTCCAATTCCCTCTATTTAACCCTCTTTTTCTTCTCCTTCTTCACCTCTCTCTCTCTTTCTCTCTCTCAATTCTCTTTCTACCAACACCAACATGGGTGGCATCAGCCTCGAAGAAATAAAAAACGAGAACGTCGATCTGGAACGGATTCCAATAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGAGCAGGTCTAACGTCTGACGAAGGGGCCAACAGGCTCCAAGTCTTTGGACCAAACAAATTGGAAGAGAAAAAAGAGAGCAAGTTTTTGAAGTTCTTGGGTTTTATGTGGAACCCCTTGTCTTGGGTCATGGAAGCTGCTGCTATAATGGCCATTGCTTTGGCAAACGGAGGAGGAAGGCCCCCAGATTGGCAAGACTTTGTGGGAATCATTGCTCTGCTTGTGATCAACTCTACCATCAGTTTTATTGAGGAAAACAATGCTGGCAATGCTGCTGCTGCTCTTATGGCTGGATTAGCTCCCAAGACCAAGATAATCACCCTTTGCAACTGCAAAGAGGATGTAAGAAAGAAGGTTCATGCGGTGATTGACAAGTTTGCTGAGCGTGGACTTCGGTCTTTAGGTGAAGTACCTGAAAAATCAAAAGATAGTCCTGGTGGACCATGGCAATTTGTTGGTCTGCTACCATTGTTTGATCCTCCCAGGCATGACAGTGCTGAAACCATTAGAAGAGCTCTTAACCTTGGTGTGAATGTTAAGATGATTACTGGGGATCAACTTGCCATTGGAAAGGAAACAGGCCGAAGGCTTGGAATGGGAACAAACATGTACCCTTCATCTGCATTGCTTGGCCAAGACAAGGATGCTTCTATTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCAGGAGTATTTCCTGAACATAAGTATGAAATTGTGAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTAAATGATGCTCCTGCCTTAAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCCACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACCGAACCTGGTCTGAGTGTCATCATTAGTGCAGTGCTCACCAGCAGGGCAATTTTCCAGAGGATGAAGAACTATACTATCTATGCTGTGTCTATCACCATCCGTATTGTGTTTGGTTTCCTGTTTATTGCGTTGATCTGGAAGTTTGACTTTGCACCCTTCATGGTTTTGATTATTGCCATACTAAATGATGGTACCATTATGACTATATCCAAGGATAGAGTGAAACCATCCCCACTTCCTGATAGCTGGAAACTGAGGGAGATATTTGCTACTGGTGTTGTGCTAGGGAGTTACATGGCACTAATGACAGTAGTATTTTTCTGGGCAATGAAAGACACCAACTTCTTCCCGAACAAGTTTGGTGTGAGACAACTGAGAAATAGTCCTGATGAAATGATGGCGGCCTTATATCTACAAGTCAGTATAATTAGTCAGGCACTAATCTTTGTCACAAGGTCCCGCAGCTGGTCTTTTGTTGAAAGACCTGGTCTCCTCCTACTAAGTGCTTTTTTGATTGCTCAGTTGGTGGCAACTTTTATAGCGGTGTATGCTAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGCTGTACAGTGTGACTGCCTTCACTACAAAGAAAGACTACGGAAAAGAAGAGAGGGAAGCTCAATGGGCAGCTGCACAAAGGACACTTCATGGTCTTCAGCCTCCAGAAACATCTAACCTTTTCAATGACAAAAATAGCTACAGGGAGCTTTCAGAGATTGCAGAACAAGCCAAGAGACGTGCTGAAGTTGCAAGGCTTAGGGAGCTTCATACTCTAAAGGGACATGTTGAGTCAGTGGTGAAGCTGAAGGGGCTTGATATTGACACAATTCAGCAGCACTACACAGTGTAAGGAGCTTGGACAAGCTTCAAGAAGAACCAGTTCAGTGCTTTTTTTGAGAACAAAATCACATATAATGACGAAGAAAGACTCAGGCCATGACCAATCTGTCTTTTAGTTATTTAAAAGTTTGAGTCGTGAAATTTTAATGGTCTCTTTCACTGTCTCCAAGTTTTCTAGGAGATACTATGCCTCTTTACATACCAAATAACATAATTGGTAGGGTTTACTATCATCTTTTTATCTGGTAGTATGCTAGTGTTATTGCTTACTAAAATCATATACTAAAGATCAATACATTGGTATTGACACCGTTGCTCAATATTGAACTCAATCTTACTCTGTATTCCTCCAGCCAAAATAAGTTGAGGCTGAAATGGCTACCCCATTTTTACAAGGTTCTTTCTTTATAG 2551 0.4257 MGGISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSDEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGLAPKTKIITLCNCKEDVRKKVHAVIDKFAERGLRSLGEVPEKSKDSPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYMALMTVVFFWAMKDTNFFPNKFGVRQLRNSPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLSAFLIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLYSVTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00598 623 PRINTS H+-transporting ATPase (proton pump) signature 150 168 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste8g00598 623 PRINTS H+-transporting ATPase (proton pump) signature 320 345 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste8g00598 623 PRINTS H+-transporting ATPase (proton pump) signature 289 305 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste8g00598 623 PRINTS H+-transporting ATPase (proton pump) signature 261 277 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste8g00598 623 PRINTS H+-transporting ATPase (proton pump) signature 461 482 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste8g00598 623 Gene3D - 137 189 IPR023299 GO:0000166
Pste8g00598 623 FunFam ATPase 4 plasma membrane-type 273 516 - -
Pste8g00598 623 Pfam haloacid dehalogenase-like hydrolase 183 303 - -
Pste8g00598 623 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 534 IPR023298 -
Pste8g00598 623 PRINTS P-type cation-transporting ATPase superfamily signature 206 216 - -
Pste8g00598 623 PRINTS P-type cation-transporting ATPase superfamily signature 184 195 - -
Pste8g00598 623 PRINTS P-type cation-transporting ATPase superfamily signature 289 308 - -
Pste8g00598 623 PRINTS P-type cation-transporting ATPase superfamily signature 312 324 - -
Pste8g00598 623 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 136 195 IPR023299 GO:0000166
Pste8g00598 623 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Pste8g00598 623 Gene3D - 572 623 - -
Pste8g00598 623 FunFam Plasma membrane ATPase 182 337 - -
Pste8g00598 623 SUPERFAMILY HAD-like 181 335 IPR036412 -
Pste8g00598 623 Coils Coil 574 594 - -
Pste8g00598 623 PANTHER CALCIUM-TRANSPORTING ATPASE 135 555 - -
Pste8g00598 623 Gene3D - 66 136 - -
Pste8g00598 623 Gene3D - 327 516 - -
Pste8g00598 623 Gene3D - 190 326 IPR023214 -
Pste8g00598 623 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Pste8g00598 623 NCBIfam HAD-IC family P-type ATPase 264 379 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00598 Pste-Chr8 3095697 3106129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00598 131 623 Primary Pumps ATPases AT2G24520 82.319 0.0 879
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00598 8 3095697 3106129 Pste8g00598 8 3095697 3106129 ECH
Pste8g00598 8 3095697 3106129 Pste2g02000 2 20193508 20198711 PCT