Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00583 AAAGGAAAGCAGCGGTGTATTAGGGTTTTAGCCCTTAGCAGTGGAACAGCAGGTGACGGAGGCAATCGGTGGATATGAGGTTTCACCAGTACCAGGTTGTGGGAAGGGCTCTTCCTACCGAAACCGATGAGCATCCTAAGATCTATCGCGTGAAACTCTGGGCCACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTATTTTTTGAGAAAATTGAAGAAGGTCAAGAAAAGCAATGGGCAAGTGCTAGCCATCAATGAGATTTTTGAGAAAAATCCTACCAAGATTAACAATTATGGAATTTGGCTCCGTTATCAGAGTCGCACTGGCTATCATAATATGTACAAAGAATACCGAGATACTACTCTCAATGGTGTGGTCGAGCAAATGTACAATGAAATGGCATCTCGACATAGAGTGAGACATCCATGCATCCAGATAATTAAGACTGCAACCATCCCAGCTAAGCTCTGCAAAAGGGAGAGCATCAAGCAGTTCCACAATTCTAAAATCAAGTTCCCGATAGTGTTCAAGAAGGTTAGGCCCCCAAGTAGGAAGCTCAAGACAACATACAAGGCATCCAGGCCAAACCTATTTATGTGAGTTAGTTGATGGGTTTTCTCTGCTTCTCATATTATGGCTTCTTGATTCATCAGTATACATAGGAAGTGCATAGAGAAGGTGATCATGTAGTGAGAAACATCATTGCTTGCTACCATAATTTGCATTCTTTCAAGCTCTGAAGATTTTGATTTTGAAACATGGTGTTTTCTTTAATTTTATATTTTTGCAGTTGTCTATTTTAATCAATTTTGATGTATTCGTTCAAGGTTATTTTTACTTTAGTGGTTACTTTTTTGTTTCGATTCTGG 871 0.403 MRFHQYQVVGRALPTETDEHPKIYRVKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGVVEQMYNEMASRHRVRHPCIQIIKTATIPAKLCKRESIKQFHNSKIKFPIVFKKVRPPSRKLKTTYKASRPNLFM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00583 175 FunFam 60S ribosomal protein L18a 1 68 - -
Pste8g00583 175 Gene3D - 1 68 - -
Pste8g00583 175 FunFam 60S ribosomal protein L18a 69 144 - -
Pste8g00583 175 PIRSF Ribosomal_L18a 1 175 IPR021138 GO:0003735|GO:0005840|GO:0006412
Pste8g00583 175 PANTHER 60S RIBOSOMAL PROTEIN L18A 2 174 IPR028877 -
Pste8g00583 175 SUPERFAMILY RplX-like 68 143 - -
Pste8g00583 175 Gene3D - 69 144 - -
Pste8g00583 175 Hamap 50S ribosomal protein L18Ae [rpl18a]. 3 66 IPR028877 -
Pste8g00583 175 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 4 125 IPR023573 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00583 Pste-Chr8 3013764 3015495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00583 2 175 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 89.655 1.04e-118 333