Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00576 ATGGGAAGAAAATGTTCATATTGTGGAAACTTTGGTCACAATTCAAGAACATGCAACACTCACAAAGGGGGACTAAAGCTTTTTGGTGTGCAACTTGACCTCTTCTCTTCTTCTTCTTCTTCATCATCATCATCTTCTTCATCAACATCACCATCCTCTTCCTTATCTTCTTCATCAACACGCTTTGATGATATCGTGAAAAGAAGTTTCAGCATGGACTACCTCCTATCTTCAAGACCCTCCTACTCTTTTGTGCTTGGTGTGGCATGGAATGAGGAGGAGCACCGGAAATTTCTTGAAGGACTGAAGAAGCTGGGGAAGGGTGATTGGAGAGGCATATCTAAAAATTATGTGATAACAAGAACACCATCCCAAGTGGCCAGTCACGCTCAAAAGTATTTTCTTCGTCAAAATAGTTTCAATAAAAGAAAACGCCGTAGAAGCCTCTTTGATGTGGGAAGAGATGAAAGCACTACAGATGAACCGTTTAATACTAGTTTTAAAAGTGGTCAATTAGGGTCCTCAGCAGACAATATCACTTGTCCCATGTGGTTTTCTTATCATCATTCAGAGTTGAATTGGGTCACCACTTCAGCAAACTATAGCTACTGTCATAAAAGCAGTGCCCCAGATCTAGAACTCAAACTTGCAGTTCCCATGCTAGGAGAGCCATGTGACTGAACTTAATTATTATAAGTACGTGTTGTATTTGACACATTGTAGCTTCTAATAAATGTGCTTATATTACTTTTGAAGAGGTGTAAGTTGGACATTTAAAAAGAG 783 0.3946 MGRKCSYCGNFGHNSRTCNTHKGGLKLFGVQLDLFSSSSSSSSSSSSSTSPSSSLSSSSTRFDDIVKRSFSMDYLLSSRPSYSFVLGVAWNEEEHRKFLEGLKKLGKGDWRGISKNYVITRTPSQVASHAQKYFLRQNSFNKRKRRRSLFDVGRDESTTDEPFNTSFKSGQLGSSADNITCPMWFSYHHSELNWVTTSANYSYCHKSSAPDLELKLAVPMLGEPCD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00576 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 138 IPR017930 -
Pste8g00576 226 Pfam Myb-like DNA-binding domain 89 134 IPR001005 -
Pste8g00576 226 CDD SANT 89 134 IPR001005 -
Pste8g00576 226 ProSiteProfiles SANT domain profile. 85 138 IPR017884 -
Pste8g00576 226 SMART sant 86 136 IPR001005 -
Pste8g00576 226 FunFam transcription factor MYB1R1 88 139 - -
Pste8g00576 226 Gene3D - 88 140 - -
Pste8g00576 226 PANTHER TRANSCRIPTION FACTOR KUA1 3 169 - -
Pste8g00576 226 SUPERFAMILY Homeodomain-like 88 139 IPR009057 -
Pste8g00576 226 MobiDBLite consensus disorder prediction 38 59 - -
Pste8g00576 226 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 137 IPR006447 GO:0003677
Pste8g00576 226 ProSiteProfiles Myb-like domain profile. 90 134 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00576 Pste-Chr8 2978558 2980594 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste8g00576 Myb_DNA-binding 8.5e-12 CL0123