Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00573 ACATTTCACATTTCACATTTCACATTTCACATTTCACATTTCACATTTCCTTTCCCTTTACTGTTCTCTGGTTTCCTTCACTGCTAATGCAAACCATGCTTCGTTCCCAGCTTGTTCTGGTCCTGACCTCAGTCACAATACCCACCAACTATTTTACCACACTTAATCTTTCTCTTCTCCAAAATTAAATTTTCAGATGTGTTTTTCAAAGCCTTTAGTAAGGAGAGTAATTAACTAGAATCCTGTACTCGGGCTAGAATGTCTTGGTTCTACCTGCTGAAGACTTCTGCGGACAATGTTGATTGACTTGGTGCAACCCATTATGTCGTCCAACAGTTCTTTGAATGTGGAATTGTCAAAGAAGACATCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTTGGTGCATTTATAGTGTTGATTCTGTGTATATTATGGATATGGGTGATGTTTCGGAGAAAGTCTAAAAGATCTCTGGAAAAGTATCCTGTATCCCAAATACCAAATGTCTCAAAAGATATAGATGTTGACAAGGTTGGGGTGCAGAATTCTCATGTTCAACAAGAAAATGTGCCTATTCCTTTTCATGACAAGGCAAGTGATAAGACTTCAGATAATGTATCAGTTCATTTAGGAAATAGCAAATCCAGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCGATGTCAGTTGAAGAAGGAAGCTCTGGGAATGTTAAGAAACAATCTATATCATCACATGGAGGTCTGGCCACTGCCTCTCCTTTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAATCGTTTCTCAACTGAGAACATTATTGGTGAGGGTGGATATGGGATTGTTTATAGGGGCAGACTAATTAATGGGACTGAGGTGGCTGTGAAGAAGCTTCTTAACAACTTAGGGCAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCACCTTGTACGCCTTCTTGGATATTGTGTAGAAGGAGTTCATAGGCTGCTCGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGAGACATGCACCAACATGGGACGCTGACCTGGGAGGCCCGCATGAAAGTCATACTTGGCACGGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTTATTCACCGAGATATAAAGTCCAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGCGAAAGTCACATAACCACTAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGGCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTCGGGACAAGGAGGGCAGAAGAAGTAGTGGACTCTAGCCTTCAAGTTAAACCAACACAACGAACTTTGAAGCGCACTCTTTTGGTTGCTCTTAAGTGTATTGATCCTGATGCCAACAAGAGGCCCAAAATGAGTCATGTCGTTAGAATGCTTGAAGCTGATGAATATCCATTTCGAGAGGATAGAAGAAATAGAAAGAGTGGCATTGCTAGCATGGAAATTGAAACCGTGAAGGATATTGCTGGTCCATCTGATGCTGAAAAGGTGGGGCATTCTGAAAGCGACGTTAAAGGATAGGATTGACAACCCTTACCCCACGACTTAGCTTGCTTGTACACGTTATAGTAACTTATCTATCACATATATATCCAGCTGTGTTCTTAAGAAAATTTTGCTGAATCAGATGAGAGCCCGTTTGGATAGTGAAGGTTTTGTTTTTTTCTTTATTTGAATGTTGCCATTCAAGATATGATGCACCAACCTTTCAAAGAAGGTAGAATCAGTTTGGGTGCTGTGACTGTGAGTGTTAGACTGTTGGTGCTGTACAGATGTTTGTGGGGCCTATGTCTATCTTCTCCTTCCATCATTGTTCATTGTTGATTTTTTATTTTATTTTAACTCCCCTCACATGATTGTTTTCAGCTTCAATCAAGCACCTTGATGTATCAGATTTTATACCATTTCACCAACAGTTATGATTTTATAG 2252 0.4028 MLIDLVQPIMSSNSSLNVELSKKTSFLGLKRWVLIGIGVGAFIVLILCILWIWVMFRRKSKRSLEKYPVSQIPNVSKDIDVDKVGVQNSHVQQENVPIPFHDKASDKTSDNVSVHLGNSKSSDPDNISQCSSIYHHERGFSSMSVEEGSSGNVKKQSISSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATNRFSTENIIGEGGYGIVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQHGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSSLQVKPTQRTLKRTLLVALKCIDPDANKRPKMSHVVRMLEADEYPFREDRRNRKSGIASMEIETVKDIAGPSDAEKVGHSESDVKG 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00573 515 Gene3D Transferase(Phosphotransferase) domain 1 273 485 - -
Pste8g00573 515 MobiDBLite consensus disorder prediction 479 515 - -
Pste8g00573 515 MobiDBLite consensus disorder prediction 100 127 - -
Pste8g00573 515 Pfam Protein kinase domain 198 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00573 515 PANTHER OS01G0323000 PROTEIN 10 484 - -
Pste8g00573 515 FunFam Putative receptor-like serine/threonine-protein kinase 273 483 - -
Pste8g00573 515 Gene3D Phosphorylase Kinase; domain 1 178 272 - -
Pste8g00573 515 MobiDBLite consensus disorder prediction 110 127 - -
Pste8g00573 515 FunFam Putative receptor-like protein kinase 179 272 - -
Pste8g00573 515 SMART serkin_6 197 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00573 515 CDD STKc_IRAK 203 469 - -
Pste8g00573 515 Coils Coil 217 237 - -
Pste8g00573 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Pste8g00573 515 MobiDBLite consensus disorder prediction 497 515 - -
Pste8g00573 515 ProSitePatterns Protein kinases ATP-binding region signature. 203 226 IPR017441 GO:0005524
Pste8g00573 515 ProSiteProfiles Protein kinase domain profile. 197 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00573 515 SUPERFAMILY Protein kinase-like (PK-like) 181 469 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00573 Pste-Chr8 2956596 2961598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00573 5 471 Trihelix Transcription Factor Family AT1G70460 38.771 2.67e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste8g00573 Pkinase 1e-48 CL0016