Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00570 TTCCCATAACAAGCAACCACATCGAATTTAAGTCTTAGCTGAAATATCATTCTCAAAGCTACCTTTATTTTTTCTGGCACTTCCTCCTTCTCCCATCTCTTCCATCTTCCATGGCAAATGAGAAGGATCCATATTATGACCTCTTTCATTACAACCACCATGAACAACCCCACTCTTCCAGCTTTCCATTCTTTAGGGACAACAATAACTCAACACCAATTAGCTCACAAGTCTTTCAAGGGTTTAATCATAATAATCCTTCTCATCATACCACTTTCACTGACTGTTTACATGGCTCCATGGATTACAACACCCTCTCTAGAGCCTTTGACTTGTCTTGCTCATCATCTGAAGTGATCTCCTCCATTGATGAAAACCCCAAGAAGCCTAGTGCAGGCGACTCAGCTGGGATCAGTGGGAACCAATCCACACCCAATTCATCTGTCTCTTCTTCATCTGATGAAGCTGAAGCTGTGATAGAACAAGACTCAACCAAAACCCCGAAAGATAAGCAGCCAAAAGGATCTGAAGATGGAGATGATAAGCCTAAGAAAGCGAACAAGCCCAAAAAAAAAGAGAAAAAACCAAGAGAGCCTCGCTTTGCATTCTTAACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCGTACCCAAGGAGCTATTATAGATGCACGAGTCAGAAGTGCACTGTAAAGAAAAGGGTGGAGAGGTCATTCCAAGACCCATCAATTGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTTCGAGGCAGTGCTGCTAGCATGTTGTCAACACCTTCATTTTTTGGTTCCTCTTATATGGGGTCAAGCTTACCTCAAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGTCAAAATGATCACCAAAATCCAATGTTCCACCAAAGCCTTTCCCATCCACAGCCTCAACAGCACCAGGGCCAGCTCCAACTCTCTCATGACTATGGTTTGTTGCAAGACCTACTACCATCATTCCCAGGCAAACAAGAACCATGAACTTACTCAACAACTTAGTGCATGTTTCGATTTATTTATTTTAGGAAAAATAACGCTTTCATATCTCACTACTAGAAAATTTTAAATCCGTCATGGCCTTATCATATATATTTCTAAAACAAATACGTTACTAAAATTTCGGGATTCTAAAATTAGTGATGGGAAAGTAATTTCCTGTCATTAAATTGGATCACTAATTTATTAATTCTCAGTAGTGTTTTGAAAAGTTTTTTAAGAAAAAACGATTATTTTTTCAAGATAAACAGAATCAAACATGCACTTAAACCTATTCTATTAGCATATGGTGGAGCCTGCAGTAGTGTATTACACTGTCTATATATGTATGTGTAGTAAGAACTTCATTACCTGGTTACCTGCTTTTAAATCATATATATATATATATATGCGCCTAGATTTGTATGGAAATGGAAGAGAGATCTATATATATCGTAGTGGCCGGGGACCTAAGAGCATTAAATAAGTATTTTAGAGCTACTGCACATGAC 1582 0.3869 MANEKDPYYDLFHYNHHEQPHSSSFPFFRDNNNSTPISSQVFQGFNHNNPSHHTTFTDCLHGSMDYNTLSRAFDLSCSSSEVISSIDENPKKPSAGDSAGISGNQSTPNSSVSSSSDEAEAVIEQDSTKTPKDKQPKGSEDGDDKPKKANKPKKKEKKPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCTVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAASMLSTPSFFGSSYMGSSLPQDFLAQLLPSYSQNDHQNPMFHQSLSHPQPQQHQGQLQLSHDYGLLQDLLPSFPGKQEP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00570 321 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 289 IPR044810 GO:0003700
Pste8g00570 321 SUPERFAMILY WRKY DNA-binding domain 168 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00570 321 SMART WRKY_cls 175 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00570 321 Pfam WRKY DNA -binding domain 176 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00570 321 ProSiteProfiles WRKY domain profile. 170 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00570 321 MobiDBLite consensus disorder prediction 98 121 - -
Pste8g00570 321 Gene3D WRKY domain 140 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00570 321 FunFam WRKY transcription factor 57 161 235 - -
Pste8g00570 321 MobiDBLite consensus disorder prediction 277 298 - -
Pste8g00570 321 MobiDBLite consensus disorder prediction 84 164 - -
Pste8g00570 321 MobiDBLite consensus disorder prediction 122 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00570 Pste-Chr8 2936023 2938544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00570 1 321 WRKY Transcription Factor Family AT4G18170 45.882 1.37e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g00570 WRKY 1.3e-25 CL0274