Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00565 GAAGCTTGTTATCATTAATCGTCCCCAACTGCAATCTGAATGCCGAATGCACCATGCGGGAGCCCATCCTCAGCCCTTGCTCTAGGAAAGAAAAAGCAGACTACCCAGCCCTTGGTCTTGCTCCGTCACTCTTCCAATCCAGTTCTCTTATCACCAACGAAGCCAAAAATTCTATTAACCTCATACCCAACTTGGCCTTCAGGAAAGGGAAGATTACCCATCGTTCTCCCTCTACACCATCTTTGGTATTAACTGACAAGAGAGCAGATTTTCAAGAGCCCTTTGAATCACATAAGTCATCAAATGTAATAGTTAGGCTATCTTTTATTGGTGTTTTCTTGTATGTGGCAACTGAGTTGACGCTGTACATGACTAGTGGGAGTTTCAGGGGCACTTCCACTTTCAGGCACGTGGATGCTGTGTACTTCACAGTGGCAACTCTCTGCACTATTGGGTATGGGGATATCGTTCCTGACTCAACATTTACCAAAATCTTTCTTTACATGTGGTTTCATTTTGGCGGGTTTCGGATTTCTTGGTTTTCTGCTCAATGGGCTGGTTTCATACATTTACAGGAGGCGGCACTTTTGCTGGGCATGATGGATGAGAATCGATATAAGAAAATTCTGAGGACGTATATGGTTGATGAAGAGAAAAGAAGAATGAGGATAAGAACCAAAGTTTGTCTGGCTTTGGTTGTTGTAATCGGCTGCATTGCTATAGTATCAGTCATGTTGCACTTTGTTGAGCACCTGAATTGGGCTGACAGTATTTATCACTCCATTACTTCTGCTACAACAGTTGGTTATGGAGATTATTTTGTCAAATCAGTGACCGGAGGATGCTTTGCAATTATATGGCTTTTGAGAAATCGTAAGATGGCAAAAAGGGTTCTTCAGAAGAAGTTAACCTTACCAGATTTGGCGGCTGCAGATCTTGATAATGATGGATCAATCAGTAAGTCTGAGTTTGTGATATACAAGCTTAAGGAAATGGGGAAGATTACTGAGATATGCATCGTGCAGCTAAGCAAGCAATTTGATTCCTTGGAACATGGAATCTATGACAAGATTACTCTTGCTGACCCCATGGAAACTGTC 1100 0.4227 MREPILSPCSRKEKADYPALGLAPSLFQSSSLITNEAKNSINLIPNLAFRKGKITHRSPSTPSLVLTDKRADFQEPFESHKSSNVIVRLSFIGVFLYVATELTLYMTSGSFRGTSTFRHVDAVYFTVATLCTIGYGDIVPDSTFTKIFLYMWFHFGGFRISWFSAQWAGFIHLQEAALLLGMMDENRYKKILRTYMVDEEKRRMRIRTKVCLALVVVIGCIAIVSVMLHFVEHLNWADSIYHSITSATTVGYGDYFVKSVTGGCFAIIWLLRNRKMAKRVLQKKLTLPDLAAADLDNDGSISKSEFVIYKLKEMGKITEICIVQLSKQFDSLEHGIYDKITLADPMETV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00565 349 SUPERFAMILY Voltage-gated potassium channels 186 271 - -
Pste8g00565 349 PRINTS Two pore domain K+ channel signature 248 257 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste8g00565 349 PRINTS Two pore domain K+ channel signature 128 156 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste8g00565 349 Pfam Ion channel 216 271 IPR013099 -
Pste8g00565 349 Pfam Ion channel 99 166 IPR013099 -
Pste8g00565 349 SUPERFAMILY Voltage-gated potassium channels 78 166 - -
Pste8g00565 349 Gene3D - 66 169 - -
Pste8g00565 349 Gene3D - 170 273 - -
Pste8g00565 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 194 319 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste8g00565 349 ProSitePatterns EF-hand calcium-binding domain. 294 306 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00565 Pste-Chr8 2909435 2911778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00565 51 347 Ion Channels AT4G18160 38.820 1.13e-64 209