Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00564 ATGGATAGAAAGCAAGAACAAGATAAGGGGAACCCAAACATGTCTGGCATTGATGTCACTACTCTAATATCTCCAAAAGTCGCAAAAGCAGTTTCACCAGTTTCTTCTGCAGCAGAAGGGGACACCCTAAGGCGACCACGTGGCCGCCCAGCTGGCTCCAAAAACAAACCTAAGCCTCCAATAATTGTCACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTTAGTTCTGGCTGCGACGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGCCTTTACATACTGAATGGAACAGGCTGTGTAACAAATGTAACATTGCGCCAACCAGGCTCATCTGGTGCCATTGTGACACTTCATGGTCGATTTGAGATTCTGTCACTTCTGGGGTCAATCCTTCCCCCACCAGCCCCTCCAGGGATCACAGGCCTCACAATTTACTTGGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTAGTTGGTGCTTTGATTGCTTCAGGCCCTCTTGTAATCATGGCTGCATCATTCATGCATGCTACTTTCGATCGTCTGCCATTGGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCAACCATCTTGATATCTCTGACTTGTATGCAATGCCACAGAACCTGCTCATGAGTGGTACAATGCCCCCGGAGATATACTCTTGGGCACCAGGGCGGAGCTTGTCAAAAACCTGA 750 0.4813 MDRKQEQDKGNPNMSGIDVTTLISPKVAKAVSPVSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYILNGTGCVTNVTLRQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTNHLDISDLYAMPQNLLMSGTMPPEIYSWAPGRSLSKT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00564 249 CDD DUF296 74 154 IPR005175 -
Pste8g00564 249 ProSiteProfiles PPC domain profile profile. 68 206 IPR005175 -
Pste8g00564 249 FunFam AT-hook motif nuclear-localized protein 71 212 - -
Pste8g00564 249 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 211 IPR014476 GO:0003680
Pste8g00564 249 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 183 IPR005175 -
Pste8g00564 249 Gene3D - 70 211 - -
Pste8g00564 249 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 200 - -
Pste8g00564 249 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00564 Pste-Chr8 2904945 2905694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00564 29 248 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 72.973 8.04e-101 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00564 8 2904945 2905694 Pste8g00564 8 2904945 2905694 ECH