Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00546 GAAACCCTGAAAAAAGGAACGGTTTAAGGCCAAAACGCAAAACGGAAACGCAAACGCAAACGCAAACGCAAACTCAAACGCAAACGCAAAAGCACAGAATTGTATCGATTAAGAGAATCTCAATCATCCATTGCGGTCGATGATCCATGCCCAAGATGAAGCAGCTTCTCAGAAAGCTTCACATCGGTGGTGGCGCTGCCACCATCAATCACAGTCACAATCACAATCACAATCACAACGCATTGTCGTCGCACACTCACAATCACACTCCCTCCTCTTCAACGCTCCCTTCGCCCACCGTCGTTTCGGATCGGAGCCCCGTCGTGGAGGCGCAAAACGAAGTCGTTGATTTCAATTTATTGCAAGAGGAAGAGTTTCAGATGCAACTCGCGCTGGCTATCAGCGCCTCCGATTCCGATCGCCGTGACACCGCCGAATCGGCGCAGATCGACGCCGCCAAACAGATCAGCCTCGGTTATTCTGCTTCTCTTACTGACACTCAAGCCCTAGTTCAGTTCCAATCCCTTCGTTATTGGAACTACAATGTGATAGGTTATGATGAGAAAGTGATGGATGGGTTTTATGATGTTTATGGGGTTACCTCGAATTTGGTTGAGCGGGGGAAGATGCCACTGTTGGTGGATCTGCAGATTGCTCCGGTCTCGGGAGACGTTGATTGTGAGGTGATTTTGGTGAACCATGTGGTTGATCTGGAGCTCAATAAGCTTGAGAGGAAGGCGTGTAGTCTGGTTGAGGAGTGTTGTGTTTCTGAACTGGGACTGGTTTTGAGTGGCTTGCTCCAGAAGCTTGCGGATGTTGTTGTTAATAGGATGGGTGGACCCGTTGTCAATGCTGAGAAACTTATGAAGAGGTGGGCTATGAGGAGTCATGAGTTACGGGATTCTATGCAAACCATTGTGCTTCCCCTTGGCTGTCTCGATGTCGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTTCTTGCTGATAGGATTAATATTCCTTGTATGTTGGTAAAAGGGAGCTACTATACAGGAACTGATGATGGGGCTGTTAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGCACTCTTATTCCAGCTGAGGTACCAAGCAGCCAGCTGGAAAGCAACAGTTTTGCTGTTAGGGGCTGTGCAGACATTGAAGGACTGCCAAACAAGACACATTCAATGGTGGATGATGGCACTCTGCCTGGAGTCTTTTCTGATTGTGATAGAATGTCGACTATGGAGATGATACAGAAAGAAGAATTATTAGTTATGGGCAATCAAACAAAGCCAGATGAAATAAATAATGTTAAAGTAAATGAGAAATGGAGATTTGGACATACAGAATCATATGAATGCTCATCACATACAGAATCTTCACCTGCTGAGAATATGCGTGTAAAAAATGTCTCCAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAACTGCATAATGTTCTCGTAGAGAGTGGTGCCTTACCTCCTCCTGATCTTTTTTCAGACATAAATTCTCAAGATAGGGGTGTAGATAAAGTAAATGAAACTATTGTTGATTCTGTTCAAGCTGACACAAATAGATTCTTATTAGGCTATGAAAAGTCTCTCATACCCTCACATAGGTTGGGCTCTGCCAGTGATACCAGGTTATGTCAATCAGCTGACTGGTTAGCTGAACAGCAAAAAGAATTGCATATAGAAGATGTTGAATTTTACAATTCTTCACAGGGGGAAAATAGAAGGAAGTTTTTAATTGTTTCAGATAGGAGTAATGACATAGAGCAATCTAACACCACAAATTTTGATTTGCCCAAGGCAGCTCTTTCCTGCAAAATGCAGAATGGGGTTGACTGTTTCTGTGAAGATGATGAAAATGATTCTAAAAACCATGTTGGAGCTTCTTTTAATAACAGTGAATTGGGGAAAGATTCAGCCGTTCAAATAAATGAGATGGTGGGGGTCAATGGAGATTATTGCTATGATAGAAAAAAGGAAGTTAACCCAGTGCTCGGTGAAGACTCAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGTATCGGTTCTTATGGTGAAGTTTATCGTGCAGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTTGACCAAGATTTCTCGGGTGATGCACTAGCTCAGTTTAAATCTGAAGTTGAGATCATGTTAAGGCTGCGACATCCTAATGTCGTACTCTTCATGGGAGCTATTACTCGCCCCCCACATTTCTCCATCCTGACTGAGTTTCTTCCAAGAGGCAGTTTATATAGGCTATTGCATCGTCCCAATCTTCGACTTGATGAGAAGAAACGTTTGCGCATGGCTCTAGATGTGGCTAAGGGAATGAATTACTTGCACACTAGCCATCCTCCCATTGTTCACCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAGGCATTGGGTTGTTAAGGTCTGTGATTTTGGTCTGTCACGAATGAAGCACCATACATTTTTGTCATCAAAATCCTGCGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTGAGAAATGAGCCTGCTAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGACTACTGCAAGAATTCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTAGGATTCCAAAATAAACGGCTTGAAATTCCAGAAGATGTCGATCCAGCAGTAGCACAGATAATACGTGATTGCTGGCAAACGGAACCACACTTGAGGCCATCATTCTCACAGCTGATGACTCGTCTTTACCGTCTTCAACATTTGATTGTCCCAAAAGCGGGCTCAACACATTAAACGAAGTTGTCTATAACATAGCTATTGCAATAATACTTAAAAGTTGTTCCTGGTTCAAAGAACCAGAGCAGCTAAAGTTTTTCTTCTTTTTTTCGTTTCATCCCATCTTGACATATCAAGAGATTGCTGAACTGGGAAGTGTCGGGTACATACAAAGTTGGGACTGGACGCAACCCATTAAAAAAAGAGCAAGGTCCCTCCCCAATATCTGCATAAGTGCAGCGGAGGTTTAGTTGAAGTAGGCACAAATGAAGATTCCCCAGAGGGAAGAAAGCAAGAAACAAAAAAAAAAAAAAAAAAGTACAAAATTATTCTTTGTCTGTAGAGGTCTTATTTGGAATTGTAAACATGCGATCTCTCAGGTTCTCGTGCAAATGTAAAAAGAAGTAAAAAAAAAAAAGAGAAAACATTATGTATTCGGAATTACTCAGCTTGAGTTTTTCTTGAGCAAGTATATCTCCTACCTGTTATGATCAACCTAATTTGATATTTGGTATGGATTGCCACACCCAAATTGTCAAAACATTTACAAG 3430 0.4245 MPKMKQLLRKLHIGGGAATINHSHNHNHNHNALSSHTHNHTPSSSTLPSPTVVSDRSPVVEAQNEVVDFNLLQEEEFQMQLALAISASDSDRRDTAESAQIDAAKQISLGYSASLTDTQALVQFQSLRYWNYNVIGYDEKVMDGFYDVYGVTSNLVERGKMPLLVDLQIAPVSGDVDCEVILVNHVVDLELNKLERKACSLVEECCVSELGLVLSGLLQKLADVVVNRMGGPVVNAEKLMKRWAMRSHELRDSMQTIVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQLESNSFAVRGCADIEGLPNKTHSMVDDGTLPGVFSDCDRMSTMEMIQKEELLVMGNQTKPDEINNVKVNEKWRFGHTESYECSSHTESSPAENMRVKNVSKYVLSAAKDPEFAQKLHNVLVESGALPPPDLFSDINSQDRGVDKVNETIVDSVQADTNRFLLGYEKSLIPSHRLGSASDTRLCQSADWLAEQQKELHIEDVEFYNSSQGENRRKFLIVSDRSNDIEQSNTTNFDLPKAALSCKMQNGVDCFCEDDENDSKNHVGASFNNSELGKDSAVQINEMVGVNGDYCYDRKKEVNPVLGEDSEWEIQWEDLDIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNLRLDEKKRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDRHWVVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTARIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPAVAQIIRDCWQTEPHLRPSFSQLMTRLYRLQHLIVPKAGSTH 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00546 916 SMART serkin_6 649 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00546 916 MobiDBLite consensus disorder prediction 20 57 - -
Pste8g00546 916 SUPERFAMILY Protein kinase-like (PK-like) 640 907 IPR011009 -
Pste8g00546 916 Gene3D Transferase(Phosphotransferase) domain 1 728 911 - -
Pste8g00546 916 Pfam Ethylene-responsive protein kinase Le-CTR1 123 326 - -
Pste8g00546 916 MobiDBLite consensus disorder prediction 17 57 - -
Pste8g00546 916 Pfam Protein tyrosine and serine/threonine kinase 650 901 IPR001245 GO:0004672|GO:0006468
Pste8g00546 916 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Pste8g00546 916 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 120 901 - -
Pste8g00546 916 FunFam Serine/threonine-protein kinase CTR1 728 911 - -
Pste8g00546 916 FunFam Serine/threonine-protein kinase isoform 1 639 727 - -
Pste8g00546 916 ProSiteProfiles Protein kinase domain profile. 649 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00546 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Pste8g00546 916 Gene3D Phosphorylase Kinase; domain 1 642 726 - -
Pste8g00546 916 PRINTS Tyrosine kinase catalytic domain signature 762 780 IPR001245 GO:0004672|GO:0006468
Pste8g00546 916 PRINTS Tyrosine kinase catalytic domain signature 828 850 IPR001245 GO:0004672|GO:0006468
Pste8g00546 916 PRINTS Tyrosine kinase catalytic domain signature 872 894 IPR001245 GO:0004672|GO:0006468
Pste8g00546 916 PRINTS Tyrosine kinase catalytic domain signature 809 819 IPR001245 GO:0004672|GO:0006468
Pste8g00546 916 PRINTS Tyrosine kinase catalytic domain signature 723 736 IPR001245 GO:0004672|GO:0006468
Pste8g00546 916 CDD STKc_MAP3K-like 655 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00546 Pste-Chr8 2832737 2842290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00546 1 915 MAP Kinase Kinase Kinase AT5G11850 54.158 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pste8g00546 PK_Tyr_Ser-Thr 4.2e-65 CL0016