Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00537 CGACATTTCAGTGTCACAGTGGCAGTTCCATGTGCTCCCCACTCGCAAATTCATATAAATAAGATAACAGATTAGGTTCCTAGGCGCTTCATTTTCATCACTCATGCTTCTGTTTCAGGATGTCTCATCTCACCGTGTCTTCTCAGAACCGTTCTTGCAGTCTCTGCGCGAATCCTTCACGAGCTCCACCTGTGAGAGAAAGGAGTTAGAGCAATGCTGCGACGAGTCGGCGGCGTTGGTTTTGAAATTCGTGGCCATGGCGTCCATTTTAATCGCCGGATTTTGCGGGATCGCGATTCCGCTGGTCGGAAAATCGCGGCGGTTTCTGCGACCGGAAGGGGACGTGTTCGCGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTCTCGCCACGGGGTTCGTGCACATGCTGAAGGACTCGTGGGACGCGCTGGGGGACCCGTGTTTGGGGACGCGCGGCGCGTGGGCCAGGTTCCCTTTCACCGGTTTCTTCGCCATGGTGTCTGCGCTCTTCACGCTCCTCGTTGACTTTGTAGCAACTGAGTATTACGGGCGCAGAGAGGGGCGTGGGCGCGTGGAGCGTGGCAAGCTTGTTGACGACGGTGCTAGTGAGATTGAGGATGCTTTGTTGGAAACAGGAATCGTGGAGGTTAAGGATGTTGTTGGTGTTAGCAAGGAAAGACACTCCCACTCCCACTCTCACCATTGCCACCACGTCCAAAGTACGGTTCGGCACGTCGTCGTTTCACAGGTTTTGGAACTTGGGATTGTATCTCATTCGATGATAATTGGGTTATCTCTAGGAGTTTCTGAGAGCCCTTGTAGCATGAAGCCCCTAATTGTGGCATTATCCTTCCATCAGTTCTTTGAAGGATTTGCACTTGGTGGATGCATCTCCCAAGCCCAATTCAAGACCTTATCAGCAACAATCATGGCATGTTTCTTTGCACTAACAACGCCAATTGGTGTTGTTATTGGGACAAGTATTGCATCAACTTTTAACCCTTACAGTCCAGGAGCACTCGTCACTGAAGGCATCTTGGACGCTTTGTCTGCTGGCATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCTGATTTTCTTAGCAACAAAATGCGTTCTAACTTCAGGCTGCAGATAATATGTTACTGTTTGCTTTTTCTTGGGGCTGGATCCATGTCTTCACTGGCAATTTGGGCATGATCTTTTTCAATCTTCTTGTAAATTATTACTTTTCAATCAATATAGAAGTATAGCTTCATTGTTTTTAGGGTTG 1277 0.4918 MLLFQDVSSHRVFSEPFLQSLRESFTSSTCERKELEQCCDESAALVLKFVAMASILIAGFCGIAIPLVGKSRRFLRPEGDVFAAAKAFAAGVILATGFVHMLKDSWDALGDPCLGTRGAWARFPFTGFFAMVSALFTLLVDFVATEYYGRREGRGRVERGKLVDDGASEIEDALLETGIVEVKDVVGVSKERHSHSHSHHCHHVQSTVRHVVVSQVLELGIVSHSMIIGLSLGVSESPCSMKPLIVALSFHQFFEGFALGGCISQAQFKTLSATIMACFFALTTPIGVVIGTSIASTFNPYSPGALVTEGILDALSAGILVYMALVDLIAADFLSNKMRSNFRLQIICYCLLFLGAGSMSSLAIWA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00537 366 Pfam ZIP Zinc transporter 47 363 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pste8g00537 366 NCBIfam ZIP zinc/iron transport family 30 366 IPR004698 GO:0005385|GO:0016020|GO:0071577
Pste8g00537 366 PANTHER ZINC/IRON TRANSPORTER 44 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00537 Pste-Chr8 2763976 2767258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00537 21 366 Inorganic Solute Cotransporters AT1G10970 57.105 5.30e-140 401
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00537 8 2763976 2767258 Pste8g00537 8 2763976 2767258 ECH
Pste7g01648 7 15351214 15352387 Pste8g00537 8 2763976 2767258 ECH
Pste8g00537 8 2763976 2767258 Pste2g01295 2 14278085 14280015 PCT
Pste7g01648 7 15351214 15352387 Pste8g00537 8 2763976 2767258 PCT