Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00530 TCTTAATCTTTACAATAAAAAATAAAATATAAAAAAAGAAGAAAGTGAAAAAGAAGGGATAAAAGAGGTGGGTGGAGAGATACTGAGTCGCTGGAATGAGCAGGTCAAAGAACCCAATCCCAATCCCAATCCGAATCCGAATCCGAATCCGAATCCCAATCCCACTGGCATCATTCTTATTCTTATTTATACCCTATTCACACACACACTCGTCTTGTTATTCTCATCCCAATCCCACCCCATGGATGACAAGAACCAGTTCCAGCGTCGCTTCTCGCTCGGCCGCCAATCCTCCCTCGCGCCGGAATATGAAGGCGGCGGAGACGGAGACGGCAACGGCAACGGCAACTCGTTGGATTCAACGGTCCGCTTGATGTATCTGGCCAACGAAGGGGACTTGGAGGGGATTACGGAGCTCTTGGACTCCGGTAGTGACGTCAACTTCACCGACATTGACGGCCGCACCTCCCTCCACGTGGCCGCCTGCCAGGGCCGCACCGACGTCGTCGACCTGCTGCTCCGTCGAGGCGCCCTCGTCGATCTCCAAGACCGCTGGGGCAGCACCCCTCTTGCTGATGCAATGTACTACAAAAACCACCACGTTGTCCAGCTTCTGGAGAAACACGGTGCACGACCACCGATGGCTCCCATGCATGTGCAGAATCCTCGTGAAGTCCCAGAGTATGAGATAAATCCTTCTGAACTTGATTTTACTAATAGTGTTTGTATAACAAAGGGGACTTTTCGGATTGCATTATGGCGTGGAACTCAGGTTGCTGTCAAGACTCTTGGGGAGGAAGTGTTCACTGATGATGATAAAGTAAAGGCATTTCACGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTCCAATTTTTGGGTGCTGTAACACAAAGCTCCCCAATGATGATTGTCACAGAATATCTACCTCAGGGGGATCTTCGTGCCTACTTGAAGCGCAAAGGTGCATTAAAACCAATGATAGCTGTGAAATTTGCACTTGATATTGCTAGGGGAATGAACTATTTGCATGAACATAAACCCGAAGCCATTATACATCGAGATCTTGAGCCTTCGTATGTTTTATGCTCTCTTGCCATGTCTAATAACAGAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAAGTTGCTAAAACAGTCAAAGAAGACAAACCTGTGACGTCCCTGGATACATCATGGCGTTATGTTGCTCCAGAGGTCTATAGAAATGAGGAATATGACATAAAAGTGGATGTGTTTTCATTTGCTCTAATAATACAGGAGATGATTGAAGGTTGTCCACCATTTTATGCAAAGCCAGAAAATGAAGTTCCTAAAGCGTATGTTGAAAATGAGCGTCCACCATTTAGAGCTTTGCCAAAGCTTTATGCTTATGGACTAAAAGAGTTAATTGAGGAATGCTGGGATGAAAAATCATACAGAAGACCCACATTTAGACAAATAATAGGGAGATTGGAAGGCATCAACCACTGTCTTGCTCAAAAAAGGCGCTGGAAGGTTCGGGCTCCTGCATGCATCCAGAACCTGGAAGCCCTATTTAGGGGTAATCGCACAAATCCAAGTAGCCGATCATCTCGCTCTGCCACCAGATGAATATTTGCCATGCATACCTTTTTTCTTTTATTTTTTTTGTAAATAACTTTCTCTCTATAGATTGAATAAATTTTAAAATGAATCTGACATATCCCTCTGTAATTGTCCACTTATTCTTTCTAGCTCTATCTTCCATTCTCATCTGTTTGTACCCAAAGAATTTAAAACATATTTGGACCGCTGGCCGGACACCTATCCTTATGCAACTGTTAAATATACTTTTTTC 1883 0.4408 MDDKNQFQRRFSLGRQSSLAPEYEGGGDGDGNGNGNSLDSTVRLMYLANEGDLEGITELLDSGSDVNFTDIDGRTSLHVAACQGRTDVVDLLLRRGALVDLQDRWGSTPLADAMYYKNHHVVQLLEKHGARPPMAPMHVQNPREVPEYEINPSELDFTNSVCITKGTFRIALWRGTQVAVKTLGEEVFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLRAYLKRKGALKPMIAVKFALDIARGMNYLHEHKPEAIIHRDLEPSYVLCSLAMSNNRNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDIKVDVFSFALIIQEMIEGCPPFYAKPENEVPKAYVENERPPFRALPKLYAYGLKELIEECWDEKSYRRPTFRQIIGRLEGINHCLAQKRRWKVRAPACIQNLEALFRGNRTNPSSRSSRSATR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00530 471 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Pste8g00530 471 FunFam serine/threonine-protein kinase STY46-like 150 233 - -
Pste8g00530 471 Pfam Protein tyrosine and serine/threonine kinase 175 425 IPR001245 GO:0004672|GO:0006468
Pste8g00530 471 FunFam Os01g0748600 protein 143 446 - -
Pste8g00530 471 Gene3D Phosphorylase Kinase; domain 1 150 232 - -
Pste8g00530 471 SMART ANK_2a 72 101 IPR002110 GO:0005515
Pste8g00530 471 SMART ANK_2a 105 134 IPR002110 GO:0005515
Pste8g00530 471 SMART ANK_2a 39 68 IPR002110 GO:0005515
Pste8g00530 471 FunFam Integrin-linked protein kinase family 26 148 - -
Pste8g00530 471 Pfam Ankyrin repeats (3 copies) 44 132 IPR002110 GO:0005515
Pste8g00530 471 Gene3D - 21 146 IPR036770 -
Pste8g00530 471 Gene3D Transferase(Phosphotransferase) domain 1 234 456 - -
Pste8g00530 471 SUPERFAMILY Protein kinase-like (PK-like) 156 429 IPR011009 -
Pste8g00530 471 ProSiteProfiles Protein kinase domain profile. 99 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00530 471 PIRSF ILK 2 448 - -
Pste8g00530 471 SUPERFAMILY Ankyrin repeat 43 137 IPR036770 -
Pste8g00530 471 CDD STKc_MAP3K-like 171 426 - -
Pste8g00530 471 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 126 434 - -
Pste8g00530 471 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00530 Pste-Chr8 2730259 2738248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00530 8 441 MAP Kinase Kinase Kinase AT4G18950 64.384 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pste8g00530 PK_Tyr_Ser-Thr 7.9e-49 CL0016