Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00520 ATGGAGAATTTGTTTGGTGTGAAGGCAACTGAGATCCAGATATGGGCATTGGGCACAAACACACTGTTGCATTTAGGGATCCAAGTTTTGAGTTTTTCATTGACATGGACATGGCTACGCGCTTGCAAACCCCGTTCCTTCCAACTTCTTTTGGTGATGGAACCCAATTTAGGTTGTTCCTGGATGCTCTTTCTACTTCTCCTATTTGCTTCTTCTTCTATTTTCCTACCACACTTACACTTGGCTAAGGCTTCTGCAGCCACTCCCAAGCTCAACTCTCAAGAGGTCAAGGCATTGAAGCAGATAGGAACCAAGATTGGGAAGAAGGATTGGAACTTTGGGGTCGATCCTTGCACTGGAAAAGGGACTTGGAATGTGTCTGATGATAGGAAAGGCTTTCAGAGTTTCGTTCTCTGTAATTGTTCCTTCAATAACAATTCTGCTTGCCATGTTGTAAGCATATCCTTGAAGGCTCAGAATCTGTCAGGTAGTCTCTCACCAGAGTTTTCCAAGCTTCATTATCTCAAACAATTGGACCTTAGTCGTAACATCATCACTGGTTCTATACCTCCAGAATGGGGTACCATGCGCTTGGTTGAGCTCTCTTTAATGGGCAACAGATTGTCAGGGCCATTCCCCAAAGTTCTCACCAATATCACTACCCTCAGAAACTTGAGCATTGAAGGAAATCAATTTTCAGGCCACATTCCAACGGAGATTGAGAAGCTGACCAATTTAGAAAAACTTATTCTGTCATCCAATGGACTCACAGGAGCATTGCCACCTGCACTTTCCAAGTTGACCAAGTTGATTGATTTGAGGATAAGCGACAATAATTTCTTTGGACAGATACCTGATTTCATTAGTAGTTGGACATCAATTGAAAAGCTACATATGCACGGTTGTTCTCTTGAGGGGCCCATACCTTCTAGCATTTCTGCCTTGACAAGATTAAGTGATTTGAGAATAACCGACCTAAAAGGTAGTAAAAGCTCTGCTTTCCCTCCACTAAATAACTTGAAATCCATGAAGACACTGGTATTGAGAAAATGCATGATTAAAGGAGAAATCCCAGGATATATTGGGAAAATGGAAAAACTGAAAATTTTAGATTTGAGCTACAATGGCTTGAGTGGAAAGATACCAGATTCTTTTGCCGAACTAGACAAAGTAGACTTCATGTATCTTACAGGGAACAAGTTATCAGGGATTATACCGCCCTGGGTACTTGGAAATAACAAAAATATTGATGTCTCTGACAATAACTTCTCCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGCAGCATAAATCTTGTTGAGAGCTACTCTCCATCTGTAAATGCACAAAATAAGATTCATACATGCTTAAAAAGGAACTTTCCTTGCCCTACTTCAGCTAGCCAATATCAGTACTCCCTGAACATTAATTGCGGTGGTAAGGAAGCAAATATTAGTGGTAATATTTATGAAGCAGACGGTGAACGAAAGGGTGCTGCAATGCTATATTACACTGGTCAGGATTGGGCACTTAGTAGCACTGGAAACTTTATGGACAATGATATTGACTCTGATTCATATATTGTGACCAATGCTTCTAGACTTAATGTCTCTACACTCAATTCACAATTATACACAACAGCTCGTGTTTCTCCCCTTGCTCTCACATACTATGGCCTCTGCCTAATAAATGGAAATTACACTGTTAAGCTTCACTTTGCAGAGATTATTTTCATCAATGATAGATCACTTAACAATCTTGGGAAGCGCGTATTTGACGTTTATATCCAGGGAAATTTAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAGCCAATTGTGAAGACATTTAATGCTACTGTAACCCAACATACTTTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATACCCACAAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAACCCTAATTTTAAACCTCCATCAAGGGATGGGGACCAACCTTATGTCATACTGGCAGTTGGCATAGTCGCTGGTGTTTTAGTTGTTGTTCTTCTTGTACTGGTTCTCATGAGGAGGATGGGATGGTTAGGAGGCAAAGATCCTGTTTATAAAGAGCTTAGGGGTATAGATCTGCAGACAGGATTATTTACACTACGACAAATCAAAGCAGCAACCAAAAACTTTGATGCAGCGAATAAAATTGGAGAAGGTGGCTTTGGTTGTGTTTACAAGGGCCTACTATCAGACGGTACAATAATAGCAGTAAAGCAGCTCTCCTCAAAATCTAAACAAGGAAACCGTGAGTTTGTGAATGAGATGGGAATGATATCGGGACTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGAAACCAGCTAATACTGATATACGAGTATATGGAAAATAATTGTCTATCCCGTGTTCTTTTTGCGAGGGATCCAGACAACAGAACAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTATTGGTATAGCTAAAGCTTTGTCATATCTTCATGAAGAGTCCAGAATAAAAATAATACATAGGGATATAAAGGCAAGTAATGTATTGCTCGACAAGGATTTTAATGCTAAAGTTTCAGATTTCGGCTTGGCAAAACTTATCGAAGATGACAAAACCCATATCAGCACTCGAGTTGCAGGAACAATGTAA 2712 0.4034 MENLFGVKATEIQIWALGTNTLLHLGIQVLSFSLTWTWLRACKPRSFQLLLVMEPNLGCSWMLFLLLLFASSSIFLPHLHLAKASAATPKLNSQEVKALKQIGTKIGKKDWNFGVDPCTGKGTWNVSDDRKGFQSFVLCNCSFNNNSACHVVSISLKAQNLSGSLSPEFSKLHYLKQLDLSRNIITGSIPPEWGTMRLVELSLMGNRLSGPFPKVLTNITTLRNLSIEGNQFSGHIPTEIEKLTNLEKLILSSNGLTGALPPALSKLTKLIDLRISDNNFFGQIPDFISSWTSIEKLHMHGCSLEGPIPSSISALTRLSDLRITDLKGSKSSAFPPLNNLKSMKTLVLRKCMIKGEIPGYIGKMEKLKILDLSYNGLSGKIPDSFAELDKVDFMYLTGNKLSGIIPPWVLGNNKNIDVSDNNFSWDSSSPTECQRGSINLVESYSPSVNAQNKIHTCLKRNFPCPTSASQYQYSLNINCGGKEANISGNIYEADGERKGAAMLYYTGQDWALSSTGNFMDNDIDSDSYIVTNASRLNVSTLNSQLYTTARVSPLALTYYGLCLINGNYTVKLHFAEIIFINDRSLNNLGKRVFDVYIQGNLVLKDFDIQREAGGTGKPIVKTFNATVTQHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPSRDGDQPYVILAVGIVAGVLVVVLLVLVLMRRMGWLGGKDPVYKELRGIDLQTGLFTLRQIKAATKNFDAANKIGEGGFGCVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRVLFARDPDNRTKLDWPTRKKICIGIAKALSYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTM 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00520 903 SMART serkin_6 736 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00520 903 Pfam Malectin domain 474 659 IPR021720 -
Pste8g00520 903 Gene3D Transferase(Phosphotransferase) domain 1 812 903 - -
Pste8g00520 903 Gene3D Ribonuclease Inhibitor 220 289 IPR032675 -
Pste8g00520 903 Gene3D Ribonuclease Inhibitor 97 219 IPR032675 -
Pste8g00520 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 97 260 - -
Pste8g00520 903 ProSiteProfiles Protein kinase domain profile. 736 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00520 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 291 439 - -
Pste8g00520 903 Pfam Protein tyrosine and serine/threonine kinase 739 895 IPR001245 GO:0004672|GO:0006468
Pste8g00520 903 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 472 664 - -
Pste8g00520 903 Pfam Leucine rich repeat 343 401 IPR001611 GO:0005515
Pste8g00520 903 ProSitePatterns Protein kinases ATP-binding region signature. 742 764 IPR017441 GO:0005524
Pste8g00520 903 Gene3D - 470 664 - -
Pste8g00520 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 63 903 - -
Pste8g00520 903 Gene3D Ribonuclease Inhibitor 290 435 IPR032675 -
Pste8g00520 903 Gene3D Phosphorylase Kinase; domain 1 710 811 - -
Pste8g00520 903 SUPERFAMILY L domain-like 139 423 - -
Pste8g00520 903 FunFam Os07g0541700 protein 812 902 - -
Pste8g00520 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Pste8g00520 903 SUPERFAMILY Protein kinase-like (PK-like) 721 902 IPR011009 -
Pste8g00520 903 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 706 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00520 Pste-Chr8 2693782 2703301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00520 90 903 Receptor kinase-like Gene Family AT1G53430 50.487 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste8g00520 Malectin 6.3e-45 CL0202