Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00517 CCTAACCCTTTCACCCTTCCAAAACCACTCTCTCTTCTCTTATCTTCACATGGCATTACTTTGAAAGAGGTTTTTTCAGATAAGAGTTTCCCTTTCAGAAACCCCTTTTTTTGATTTCACAAAATGGCCGTGGAACTCATGGGGTTCCCGAAAATGGATGATCAAACGGCCATCCAAGAGGCCGCATCGGAAGGACTCAAGGGCATGGAGCACCTGATCCGCGCCCTCTCCAACCAACCCACACACTTAAACACCGAACTCACAGACATAACGGTTTCCAAGTTCAAGAAACTCATCTCGCTCCTCAACCGAACAGGCCACGCCCGGTTCAGACGCGCCCCGGTTCATTCTCCCAACCCGGTTCACATTCAAACCCCTCTTCCTCTTCCCATTCCTGTTCCGATTCCGATTTCTAATCCTAACCCTAACCTTAGCGCTCCGCCGCAAAACCCTAACCCTAACCCCACCGTACCTCTTCCGCCGCAGTTCCCTTCCTCCGCCGCCCTCCCCCACGCGCCGCCGCCGCCGGCGAGCGTCACGCTCGATTTCACCAAACCGCACAACGCGCTCCGGAGCTCCGCCGCGAAATCCGTCGAACTCGAGTTCTCCAAAGAGACCTTCAGCGTCTCCTCGAACTCCTCCTTCATGTCCTCGGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGCTCTTTCTCACGGCGGCGCCTACCTCCGCTTCCGCCGGAAAACCTCCAACCTCCTTTAAGAAACGGTGCCACGAACACCGCGAACACTCCGGCGCCGACAACGTCTCCGGCTCCTCCAAGTGCCACTGCGTCAAACGAAGGAAAAATAGGGTGAAGAAGACAGTAAGAGTGCCGGCGATAAGTTCAAAAATCGCCGATATACCCCCAGACGAGTACTCGTGGCGAAAGTACGGTCAGAAACCGATCAAGGGTTCACCGTACCCAAGAGGGTATTACAAGTGTAGCACTGTGAGGGGGTGTCCAGCGAGGAAGCACGTGGAGCGCGCACCAGACGATCCGGCGATGCTGATAGTGACATACGAAGGAGAGCACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAGAGAACGTGGAATTAAAAAAATGAAAAATAAAAAAAATAAAAAATTGGGAAGTGGAAGACTTTTCTTTTTAAAATGATTATTTTTGGGAAGTGTAGTGGGAAGAAGAGAAAGAACAATGGCTGCTTTGTAAATTTGGTTTATCATTATTATTATTATTATTATAATATTTTAGTGTCATAGATAGGTGAAAATTGGAATCTAAAGTTTATTTGTTTC 1350 0.5096 MAVELMGFPKMDDQTAIQEAASEGLKGMEHLIRALSNQPTHLNTELTDITVSKFKKLISLLNRTGHARFRRAPVHSPNPVHIQTPLPLPIPVPIPISNPNPNLSAPPQNPNPNPTVPLPPQFPSSAALPHAPPPPASVTLDFTKPHNALRSSAAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKLFLTAAPTSASAGKPPTSFKKRCHEHREHSGADNVSGSSKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00517 336 Gene3D WRKY domain 244 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00517 336 SMART WRKY_cls 257 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00517 336 Pfam Plant zinc cluster domain 209 255 IPR018872 -
Pste8g00517 336 ProSiteProfiles WRKY domain profile. 252 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00517 336 Pfam WRKY DNA -binding domain 259 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00517 336 MobiDBLite consensus disorder prediction 99 139 - -
Pste8g00517 336 FunFam WRKY transcription factor 65 241 318 - -
Pste8g00517 336 SUPERFAMILY WRKY DNA-binding domain 255 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00517 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 322 IPR044810 GO:0003700
Pste8g00517 336 MobiDBLite consensus disorder prediction 99 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00517 Pste-Chr8 2679216 2682813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00517 1 335 WRKY Transcription Factor Family AT2G24570 60.172 7.71e-113 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g00517 WRKY 9.2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00517 8 2679216 2682813 Pste8g00517 8 2679216 2682813 ECH