Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00508 ATCATAGCAGGGCTACTACTATTTGTGATAGTTCCTTTTCTGTTCAACAGTGGAAATGGATTTGAAATATCCACTCATAGCATCAATTATAGAGCATCTGAAAAGCAACCTTACAGAACTTCTTATCACTTTCAGCCCCAACAAAATTGGATGAACGGGCCTATGTACTACAAAGGTGTTTACCACCTTTTCTACCAGCATAATCCTGAAGCAGCCACCTTTGGTGATAGGATTGTGTGGGGTCACTCAGTATCCTATGATCTCATCAATTGGATTCATTTGAAGAATACTATTGAACCAAGTGAGCCATTTGACATTAATAGTTGTTGGTCAGGCTCAGCAACTATAATCCCAGGGAAAGAACAACCTGTAATTTTGTACACAGGAATTGATGATAAGAAACATCAAGTTCAGAACTTGGCTATGCCAGGGAATCTATCAGACCTCTTCTTAAGGGAATGGGTGAAACACTCTCAGAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTGAATAATTTCAGAGACCCTTCAACTGCTTGGCTAGGAAAGGATGGAAAATGGAGAGTAGTCATTGGTGCTCAAAACGGTGATGAAGGGAAGACAATCCTGTACCAAAGTGAGGATTTTGTTAATTGGACAGTGGATCCTAACCCTTTTTATGCATCTGATAATACTGGAGTTTGTGAGTGTCCAGATTTCTTCCCTGTGTTCACCAATGGCAGCACAAATGGGGTGGATACATCTGTGCAAAACCCTAGTGTTAGATATGTATTGAAGATAAGCTACCTAAGAAAACAGCATGATTACTATTTTCTTGGTAAATATGTAGATCAGGAAAACTTCATTCCTGATGTTAGGTTTACAGGAACTAGTTCAGACTTGAGGTATGACTATGGTAAATTCTATGCTTCCAAGTCATTTTTTGACTATCCCAAAAACAGGAGGATTTTGTGGGGATGGATAAACGAGTCTGACTCCACACAAGATGACATTGAGAAAGGATGGGCTGGTCTACAGAGATTGGTGCAGTGGCCCATTGAAGAGGTAGAAAAACTACGTGACAAGCACATAAGTGTAGCGGGAGAGAAACTTGTGCATGGATCAAATCTTGAAGTCTTAGATATCACTGCATCACAGGCCGATGTAGAAGTGATGTTTGAGCTACCTGAACTAGAAAATGCAGATTTTCTTAATCCAAATGGAGTTGATCCCCAAGTACTCTGTAGCCAAGAATATACATCAAGAAGTGGCATAATAGGGCCATTTGGATTGTTAGCTTTAGCTTCAAAAAATCTCAAAGAACACACTGCTGTCTTCTTCAAAATATTTAGAGCTCCCAATAGATTTGTGTGCCTCATGTGCAGTGATCAAAGCAGGTCCTCATTGCGGCATGACCTTGACAAAACTGCATATGGAACTATGTTTGACATAGATCACAATTTAAGGATGATTTCACTAAGAAGCTTGATTGATCACTCGATTATTGAGAGTTTTGGGGATGGAGGGAGAGTTTGCATCACCAGCAGAGTCTATCCATCATTGGCTATAGACAAAGATGCTCATCTTTATTTATTTAATTATGGAAGCCAGAGTGTGGTGGTCTCAAAACTGAACGCTTGGAGCATGAAGCAAGCAGAGATTGGCCATGAGGGAAACATAAGCTATACCTGAGAAGGATTAGATGATTTTTTACATTTTTGTATGTGTCTTATCATTTGCTTTTCCTTCTTTATTGGTACTCCTCCATATGATTGTTGTATCCATCATGTAACTGTTTTCAGTTTTATTTTAGAACGAATAAATTGAGCTTACCAATTTTGTCA 1826 0.3938 IIAGLLLFVIVPFLFNSGNGFEISTHSINYRASEKQPYRTSYHFQPQQNWMNGPMYYKGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLKNTIEPSEPFDINSCWSGSATIIPGKEQPVILYTGIDDKKHQVQNLAMPGNLSDLFLREWVKHSQNPVMTPPSGVEVNNFRDPSTAWLGKDGKWRVVIGAQNGDEGKTILYQSEDFVNWTVDPNPFYASDNTGVCECPDFFPVFTNGSTNGVDTSVQNPSVRYVLKISYLRKQHDYYFLGKYVDQENFIPDVRFTGTSSDLRYDYGKFYASKSFFDYPKNRRILWGWINESDSTQDDIEKGWAGLQRLVQWPIEEVEKLRDKHISVAGEKLVHGSNLEVLDITASQADVEVMFELPELENADFLNPNGVDPQVLCSQEYTSRSGIIGPFGLLALASKNLKEHTAVFFKIFRAPNRFVCLMCSDQSRSSLRHDLDKTAYGTMFDIDHNLRMISLRSLIDHSIIESFGDGGRVCITSRVYPSLAIDKDAHLYLFNYGSQSVVVSKLNAWSMKQAEIGHEGNISYT 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00508 557 SMART glyco_32 43 503 IPR001362 GO:0004553|GO:0005975
Pste8g00508 557 Pfam Glycosyl hydrolases family 32 C terminal 349 542 IPR013189 -
Pste8g00508 557 Gene3D - 360 543 - -
Pste8g00508 557 SUPERFAMILY Arabinanase/levansucrase/invertase 34 347 IPR023296 -
Pste8g00508 557 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 32 548 - -
Pste8g00508 557 Gene3D Glycosyl hydrolase domain; family 43 47 359 IPR023296 -
Pste8g00508 557 SUPERFAMILY Concanavalin A-like lectins/glucanases 346 545 IPR013320 -
Pste8g00508 557 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 358 543 - -
Pste8g00508 557 CDD GH32_Fruct1-like 49 340 - -
Pste8g00508 557 Pfam Glycosyl hydrolases family 32 N-terminal domain 43 343 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00508 Pste-Chr8 2633370 2636396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00508 55 548 Glycoside Hydrolase AT3G13790 54.739 0.0 550