Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00480 GGGATTGATATTGGAAACGAGAACTGTGTGGTTGCTTCAGTGAAGCAACGTGGGATTGATGTTTTGTTGAATGAAGAATCCAAACGTGAAACCCCTGCCGTGGTTTGCTTTGGAGAAAAGCAAAGGTTTTTAGGGTCAGCTGGTGCTGCTTCTGCTATAATGCACCCCAAATCTACAATATCTCAAGTTAAGAAACTAATAGGCAGGAGGTTTGTGGACCCTGATGTTCAGAATGAGTTAAAAGTGCTACCCGTTGATTGCTCGGAAGGCCCAGACGGTGGCATTCTGATTCATATCAAGTACTTGAAAGAGACGCGTGTGTTTACCCCCGTTCAAATATTAGCAATGCTCTTTGCTCACTTGAAGACTATTGCTGAAAAAGATTTTGGGTCTGCTGTTTCTGACTGTGTTATTGGGGTTCCGTCATACTTTACCATCTTGCAGAGACAAGCTTATCTTGATGCAGCAACAATTGTTGGGTTGAAACCTTTAAGGTTGATCCATGATTGCACTGCAACTGCTCTTGGTTATGGAGTTTACAAAACAGATTTTCCCAGTGCAGCTCCTATTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTATCTATTGCAGCATTTCAGGCTGGTCAAGTGAAGATACTTTCACATGCTTATGACAGGAGCTTAGGGGGCATAAATTTTGATGAGGTTCTGTTTAGTCATTTTGCTGCAAAATTTAAGGAACAATACAACATTGACGTGTATTCTAATGCCAGGGCATCTAGGAGGCTTCGTGTAGCATGTGAGAAGTTGAAGAGGGTTTTGAGTGCAAATCTAGAGGCTGATCTGAGCATTGAGTGCTTGATGGATGAAAAAGATGTTAAGGGCTTTATAAAGAGGGAAGAATTTGAGAATCTGGCATCAGGATTATTGGAGAGAATTTATGTTCCTTGTAACAAAGCACTGGCCGATGCAGCCTTGACTGTACAAAAGATTAATTCTGTTGAGTTAGTTGGTTCAGGTTCACGGATTCCCGCTATAATGAGATTATTAACTTCTCTATTTAAGCGAGAGCTCAGCCGAACACTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTCCAGTGTGCGATGCTCAGTCCTGTTTTCCGTGTCAAAGAATATGAGGTCCAGGATTCTATTCCTTTTTCCATTGGACTTTCATCTGATGGAGGTCCAATTTGTGCAGGATCGGATGGTGTACTCTTACCAAAAGGCCAACCCATTCCAAGTGTTAAAATTCTAACATTTCAGTATCGTGATTTGATCCGTCTGGAAGCATTCTATGCTGATCCAGATGAATTACCTCCTGGGACATCTCCTAAAATCAGCTGCTTCACTATTGGTCCTTTTCATGGATCCCATGGAAGTGATGAAAGAATTAGAGTTCATGTTCAACTAAATTTGCATGGCATTATCAGTATTGAATCAGCTACATTGGTTGAGGATCATGTGGACGATTCAGTTACAACAGGTGCTTATCATTCTAATTCTGAAGCAACGAATGTTGAACCTGTTTCTGAGACAGTTGAAAATAACATCGAAGATGGTATCAATAAAAAGTGTGAAGCTCCGTATCATTTTATTGCTTTGATTGCAGATATGATTCATGTTGCCATGTTGGCTGATGGTACTAGAAAAGATAAAGCCAACAGAAGGCTTCCTGTGCCAGTGACTGAGAACATCTATGGTGGAATGATGAAGGCTGAGATGTTGGAAGCTCAAGAAAAAGAACTCCAGTTAGCTGATCAGGACAGAACAATAGAGCTAACAAAAGACAGGAAGAATTCGTTGGAATCTTATATTTATGAAACAAGGAGTAAGCTCTTCAGCACATATCTAAGCTTTTCAAGTGAACACGAGAGGAAGGACATATCTAGGAGCCTGAAAGAGATTGAAGATTGGCTTTATGATGATGGTGAAGATGAAACTGTAGAAGCTTATTCTGCAAAACTAGAAGATCTAAAACAGCTGGTGGATCCAATTGAGTTTCGGTATAAAGACACAGAAGCAAGACCACAAGCTACAAGAGATTTGTTAAGTTGCATTGTAGAGTATCGAATGTCTGCAGATTCTCTTCCACCCCAAGATAAAGAACTGATCACCGATGAGTGCAATAAAGCGGAGCAGTGGCTAAGAGAGATGATGCAGCAACAAGATCTTTATCCTAAGAACTTCAATCCAGTATTATTGTCAAGTGATATCAAGAGCAAGACAGAGGATTTAAACTCAGTATGCCAACAGATATTGAAATTCAAGGATTCTTCAATTCCAAAAGACAAGGGTGAAGACAACCGGGATGCTTCTGATCATCAA 2346 0.4062 GIDIGNENCVVASVKQRGIDVLLNEESKRETPAVVCFGEKQRFLGSAGAASAIMHPKSTISQVKKLIGRRFVDPDVQNELKVLPVDCSEGPDGGILIHIKYLKETRVFTPVQILAMLFAHLKTIAEKDFGSAVSDCVIGVPSYFTILQRQAYLDAATIVGLKPLRLIHDCTATALGYGVYKTDFPSAAPIYVAFVDIGHCDTQVSIAAFQAGQVKILSHAYDRSLGGINFDEVLFSHFAAKFKEQYNIDVYSNARASRRLRVACEKLKRVLSANLEADLSIECLMDEKDVKGFIKREEFENLASGLLERIYVPCNKALADAALTVQKINSVELVGSGSRIPAIMRLLTSLFKRELSRTLNASECVARGCALQCAMLSPVFRVKEYEVQDSIPFSIGLSSDGGPICAGSDGVLLPKGQPIPSVKILTFQYRDLIRLEAFYADPDELPPGTSPKISCFTIGPFHGSHGSDERIRVHVQLNLHGIISIESATLVEDHVDDSVTTGAYHSNSEATNVEPVSETVENNIEDGINKKCEAPYHFIALIADMIHVAMLADGTRKDKANRRLPVPVTENIYGGMMKAEMLEAQEKELQLADQDRTIELTKDRKNSLESYIYETRSKLFSTYLSFSSEHERKDISRSLKEIEDWLYDDGEDETVEAYSAKLEDLKQLVDPIEFRYKDTEARPQATRDLLSCIVEYRMSADSLPPQDKELITDECNKAEQWLREMMQQQDLYPKNFNPVLLSSDIKSKTEDLNSVCQQILKFKDSSIPKDKGEDNRDASDHQ 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00480 782 Gene3D - 1 370 - -
Pste8g00480 782 SUPERFAMILY Actin-like ATPase domain 191 376 IPR043129 -
Pste8g00480 782 FunFam Heat shock 70 kDa protein 4 226 309 - -
Pste8g00480 782 Gene3D - 34 109 - -
Pste8g00480 782 Gene3D - 576 688 IPR029048 -
Pste8g00480 782 FunFam Heat shock 70 kDa protein 4 107 190 - -
Pste8g00480 782 PANTHER HSC70CB, ISOFORM G-RELATED 1 770 - -
Pste8g00480 782 Gene3D Actin; Chain A, domain 4 226 309 - -
Pste8g00480 782 SUPERFAMILY Actin-like ATPase domain 1 181 IPR043129 -
Pste8g00480 782 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 383 530 IPR029047 -
Pste8g00480 782 FunFam Heat shock 70 kDa protein 4 1 87 - -
Pste8g00480 782 FunFam Heat shock 70 kDa protein 4 576 686 - -
Pste8g00480 782 PRINTS 70kDa heat shock protein signature 468 484 - -
Pste8g00480 782 PRINTS 70kDa heat shock protein signature 26 38 - -
Pste8g00480 782 PRINTS 70kDa heat shock protein signature 359 379 - -
Pste8g00480 782 PRINTS 70kDa heat shock protein signature 328 344 - -
Pste8g00480 782 PRINTS 70kDa heat shock protein signature 136 156 - -
Pste8g00480 782 PRINTS 70kDa heat shock protein signature 384 403 - -
Pste8g00480 782 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 700 760 IPR029048 -
Pste8g00480 782 FunFam Heat shock 70 kDa protein 4 34 109 - -
Pste8g00480 782 CDD HSPA4_like_NDB 1 377 - -
Pste8g00480 782 Pfam Hsp70 protein 1 674 IPR013126 GO:0005524|GO:0140662
Pste8g00480 782 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 380 609 IPR029047 -
Pste8g00480 782 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 580 675 IPR029048 -
Pste8g00480 782 Gene3D - 182 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00480 Pste-Chr8 2510270 2515897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00480 1 427 Calmodulin-binding Proteins AT1G16030 35.035 6.45e-78 262