Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00477 ATGAATTTCTTAGCCCTATCAAACAATGGGAGAGAAAAACATGCATTGAGATTACCAAATATGGTGATCACAATTTTTCTTCTCATGTTGGCCTTTCCATCTTCCCTTAAAAAAGCTGAGTCACTAAATTTCAACATAACAAACTTCAGTGACCTTGACAGTGCAAAAAACATGGCATACCAGGGTGACGGCAAAGTAAACAACAACGGTTCTATAGAACTCAACATAGTAAGCGTTCTTTTCCGCGTTGGGAGAGCCTTGTACGGACAACCTATGCGCCTTTGGGACTCATCTTCGGGTGTTGTAACTGATTTCTCGACGCGCTTTTCCTTCACCATTGACAGAGGAAACGAATCAATTGCAGAATACGCTGACGGTTTCGTGTTTTATATTGCCCCTCATGGCTTTCAGATTCCTCCAAACGCTGCAGGTGGCACTTTTGGCCTTTCCAACGGTTCTTCCAATAGCTACCTTCCCGAAAATCGCTTTTTCGCTGTTGAGTTTGATACATATATCGGTGCCAATGTTGACCCTCCCATGAAGCACGTTGGCATAGACGATAACTCTCTCAAATCGGTTAATGTTTCCGAGTTTGATATTGATAAAAATCTCGGAAAGAAATGTAACGCTTTCATATCCTACACTGCTTCCAACATCACCCTCTTTGTGTCTTGGTCCTTCAACGGAACCGCAACGTCAAATTCCAACAATTCACTTACTTACAAGATTGACCTCATGAAAATTCTGCCTGAGTTAGTGGATGTAGGGTTTTCTGCTTCAACTGGGGAACTCACTGAACGAAATGTTATTCATTCGTGGGAGTTTAGTTCTACGTTGAATTCTTCCACTACTTCGAAGAATAACCACACGGATAATAGTGCAGCGAAGAAAGGAAAAGGGTTGAGCATGGTTGTGCTGGTTGTTGCAGTGGCTTGTCCAACGATTTTGGTGGCTGTGGCAGCCAATGTTGCAGCTTGGATAGTAATCATGAAGAAGAGAAGGTGTAGGGGTGATAGTGATAATGATGGAGAAGGTGGATTTGACATGCATAGGGCTACTATACCTAGAAGATTTGAATACAAAGAACTTGTTGCAGCCACCAAAGGGTTTGCAGATGAAACAAAGCTTGGAAGAGGTGGCTCGGGACAGGTTTACAAAGGGGTTTTGAGTTATTTGGGAAGGGTTGTTGCCGTGAAGAGAATTTTCACTGACTTTGAAAATTCAGAGAGAGTTTTTAACAACGAGGTTAAGATAATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGTCACGAGCAAGGAGAGTTTTTGTTGGTTTTTGATTACATGCCCAATGGAAGCCTCGACACCCATCTTTTTGGGGAGAAAAAAACATTGACCTGGGATGTTAGGTACAAGGTAGCCTTAGGTGTGGCTTTAGCAGTTCGTTATCTTCACGAGGATGCGGAGCAAAGTGTTCTTCATAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACGGATTTTAGCACCAAACTTGGCGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAAGACTCAGAAGACAGGTGTGGTGGGAACTTATGGGTACCTTGCCCCAGAATATATAAACGGAGGTAGGGCCAGTAAGGAATCAGACATATATAGTTTTGGGGTAGTGACTCTTGAAATTGCATGTGGAAGGAGGACTTACAAAGATGGGGAGTTTCATGTGCCTCTTGTGAATTGGGTGTGGCAAGAGTATGTTGGAGGGAATGTTCTGAATGTTGTTGATGAGAAACTGAACAAAGAGTTTAATGTGGATGAAATGAAAAGCTTGATTGTTGTCGGGTTGTGGTGCACTAACCCAAACGAAAAGGAAAGGCCCAAGGCAGCAGAGGTAATCAAGGTTCTTCAGCTTCAAGCGCCATTACCAGAGCTTCCACTTGATATGCATCACGCTCCTCCTCCTTCTCTGGTTAATGCTCCTACACAACCCACTTTTAATTCCTTACAACCATTACCTTTCACTAACAGTTTTGCAAGTGTTGGACGCTAA 2055 0.4307 MNFLALSNNGREKHALRLPNMVITIFLLMLAFPSSLKKAESLNFNITNFSDLDSAKNMAYQGDGKVNNNGSIELNIVSVLFRVGRALYGQPMRLWDSSSGVVTDFSTRFSFTIDRGNESIAEYADGFVFYIAPHGFQIPPNAAGGTFGLSNGSSNSYLPENRFFAVEFDTYIGANVDPPMKHVGIDDNSLKSVNVSEFDIDKNLGKKCNAFISYTASNITLFVSWSFNGTATSNSNNSLTYKIDLMKILPELVDVGFSASTGELTERNVIHSWEFSSTLNSSTTSKNNHTDNSAAKKGKGLSMVVLVVAVACPTILVAVAANVAAWIVIMKKRRCRGDSDNDGEGGFDMHRATIPRRFEYKELVAATKGFADETKLGRGGSGQVYKGVLSYLGRVVAVKRIFTDFENSERVFNNEVKIISRLIHRNLVQFVGWCHEQGEFLLVFDYMPNGSLDTHLFGEKKTLTWDVRYKVALGVALAVRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLKTQKTGVVGTYGYLAPEYINGGRASKESDIYSFGVVTLEIACGRRTYKDGEFHVPLVNWVWQEYVGGNVLNVVDEKLNKEFNVDEMKSLIVVGLWCTNPNEKERPKAAEVIKVLQLQAPLPELPLDMHHAPPPSLVNAPTQPTFNSLQPLPFTNSFASVGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00477 684 SUPERFAMILY Protein kinase-like (PK-like) 354 669 IPR011009 -
Pste8g00477 684 SMART serkin_6 370 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00477 684 ProSiteProfiles Protein kinase domain profile. 370 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00477 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 282 IPR013320 -
Pste8g00477 684 FunFam L-type lectin-domain containing receptor kinase IX.1 447 647 - -
Pste8g00477 684 ProSitePatterns Protein kinases ATP-binding region signature. 376 399 IPR017441 GO:0005524
Pste8g00477 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Pste8g00477 684 PANTHER - 67 641 - -
Pste8g00477 684 Pfam Legume lectin domain 41 288 IPR001220 GO:0030246
Pste8g00477 684 Gene3D Transferase(Phosphotransferase) domain 1 447 653 - -
Pste8g00477 684 Gene3D - 39 294 - -
Pste8g00477 684 FunFam L-type lectin-domain containing receptor kinase IX.1 355 446 - -
Pste8g00477 684 Pfam Protein kinase domain 371 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00477 684 Gene3D Phosphorylase Kinase; domain 1 345 446 - -
Pste8g00477 684 CDD STKc_IRAK 376 638 - -
Pste8g00477 684 CDD lectin_legume_LecRK_Arcelin_ConA 42 275 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00477 Pste-Chr8 2504128 2506674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00477 27 650 Receptor kinase-like Gene Family AT5G10530 42.970 2.16e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00477 Pkinase 9.2e-49 CL0016