Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00476 TCAACCCACTTAGAAATTTTTCTTCTTTTTCCCATCCTCATCCTTCCAATAGTTCAATCACTTTCCTTCAACATAACCAAGTTTAACGACACTGAAAGCGCAAGCATCATTGGATATGCAGGTGTAGCCAAGACTGAGAACGGAACCATGCTTCTAAACCCACTCATCAGCTATGGAGTTGGACGAGCCATCTATGGCCAACCTCTACGCTTCAAAAACTCTTCCAATGGACATGTCACAGATTTTTCTACACTCTTTTCATTCACTATCGATGTGTCCACCACAACCAACTACGCTGACGGCTTTGCCTTCTACGTTGCACCCCTTGCCTACCAGATTCCACCCAATTCAGATGGTGCCAGTTTTGGCCTATACGAAAGCACACCCCAAAGTAACATAGTCGCTGTCGAATTTGACACTTTTCCAAACGTTAATTTTGATCCACCAGTGCAGCATGTAGGGATCAACAACAACTCTTTGGTATCCCTCGCTTATGCCATGTTTGATATTGGTAGCAACATAGGGAACATGGGGCATGTGTTGATAACTTATAATGCTTCTGCAAAACTCCTTGCTGCCTCGTGGTTCTTTGAGGGAACAAGTTCTGGTTTTATGCCTAACACTTCTGTTTCACACCAGATTGACCTCGGGGAAATTCTACCAGAGTGGGTCACAATTGGGTTTTCGGGTGGAACCGGGTTGTCCATTGAGAAAAATGTTATTCATTCCTGGGCATTCAGTTCAACTCTGGATCTAAATTCCACTCATCAGGAGATGAACAAAGAAAATGATGACATCATAACCAAAGATAAGTTTCAATTTCAAGTCAAAGTAGTTGTTGTTGCTGTGATTTGTTCCATTCTGGTTATGCTCGTGGTTATTAGTATTACTTGGTTGATCATCTCCAAGAAAAGAAAAAGTGATGGTTGTTTTGATTTGGATAAAGTGTCCATGCCGAGAAGATTTGGTTATAAGGAATTAGTTGCAGCAACGAACGGGTTTGCAGATGATAGAAAGCTCGGAGAGGGTGGCAGTGGACAAGTTTACAAAGGTTTTTTGAGTGATTTAGGGCGTGTGGTTGCAGTTAAAAGGATTTTTTCTGATGTTGAAGATTCTGAGAGTATGTTCACGAACGAGGTGAAGATTATAAGCCGTCTTATTCATAGAAACCTTGTGCAATTCATAGGGTGGTGTGAGGAGCAAGGGGAGTTGTTATTGGTTTTTGAGTACATGACTAATGGAAGTCTTGACACTCATCTCTTTGGCAGAAGAAGAACTTTGGGATGGGGTGTGAGGTACAAGATAGCGTTAGGTGTGGCTAAAGCGCTTCAATATCTTCATGAAGACGCGGAGCAATGTATTATTCATAGGGATATTAAGTCAGGTAATGTTTTGTTAGACACAGATTTCAATACTAAGGTTAGTGACTTTGGAATGGCAAAGTTGGTGGATCCAAGAATGAGGACTCAGAAGACAAAGGTAGTGGGGACTTATGGGTACCTTGCTCCAGAATATATAAACACAGGAAGGGCTAATAAGGAATCTGACATGTATGGTTTTGGGGTAGTGGCTTTGGAAATAGCATGTGGAAGGAAGACTTACAAGGATGGGGAACATAATTATGTGCCCTTGCCAAATTGGGTGCTGAAATGTTATGTTGATGGCAGTATTTTAGATGCTGCTGATCAGGGATTGCATGGAGATTTTGATGAGAATGAAATGGCGTGTTTGCTCACTGTGGGAATATGGTGTACTCTCCATGACCACAAAAAAAGACCAAAGGCAGAACAGTCACCATCTGTTGACTATAAACGAGCTGACCAACTGCCTGGCCGGCCATTAATTGTCAGTGAAAATTCTCTTCACGGCAACAACCCTTCCCAAATAACTCAAAACCCCTTTGTAAACCTGTCCCGAGCCACCTCTTCCAAGCTTTGTTTCATCTGCAAACCCTTTGGTGGCTGCAACAAGTTCTTTGTATTCAAATCTTCTAGGTATAGTAGCCCTATGCATGTCAAATCCACCTTCTCCATCATTATCACTATCACCCCTACACCTTCTCTTCTTCATGATTACTATCCAAGCTGCAACATTGGCTGCCACAGCCACCAAAATCGTTGGACAAGCCACTGCAACAACCAGCACAACCATGCTCAACCCTTTTCCTTTCTTCGCTGCACTATTATCCGTGTGGTTATTCTTCGAAGTAGTGGAAGAATTCAACGACCAAGACACAAAGAGGGTGATGTTGGAAGCAGTGTAGGATATGAAAGCGTTACATTTCTTTCCGAGATTTTTATCAATATCAAACTCGGAAACATTAACCGATTTGAGAGAGTTATCGTCTATGCCAACGTGCTTCATGGGAGGGTCAACATTGGCACCGATATATGTATCAAACTCAACAGCGAAAAAGCGATTTTCGGGAAGGTAGCTATTGGAAGAACCGTTGGAAAGGCCAAAAGTGCCACCTGCAGCGTTTGGAGGAATCTGAAAGCCATGAGGGGCAATATAAAACACGAAACCGTCAGCGAAAAGCGCGTCGAGAAATCAGTTACAACACCCGAAGATGAGTCCCAAAGGCGCATAGGTTGTCCGTACAAGGCTCTCCCAACGCGGAAAAGAACGCTTACTATGTTGAGTTCTATAGAACCGTTGTTGTTTACTTTGCCGTCACCCTGGTATGCCATGTTTTTTGCACTGTCAAGGTCACTGAAGTTTGTTATGTTGAAATTTAGTGACTCAGCTTTTTTAAGGGAAGATGGAAAGGCCAACATGAGAAGAAAAATTGTGATCACCATATTTGGTAATCTCAATGCATGTTTTTCTCTCCCATTGTTTGATAGGGCTAAGAAATTCATACCAAAAGAAAGAGCTAAGAACAGCAGAGAAATTCAATCCCTTTCCTTTAACATAACCAACTTTAACGACCCTGAAAGTGCAAGCATCATTGGATATGTAGGTGTAGCCAAGACTGAGAATGGAACCATGCTTCTAAACCCACCCATCAACAATGGAGTTGGACGAGCCATCTATGGCCAACCTCTACACTTCAAAAACACTTCTAATGGACACGTCACAGATTTCTCTACTCGTTTTTCATTCACTATCGATGTGTCTGATAGAAGCAACTACGGTGATGGCTTCGCCTTTTACGTGGCACCCCTTGCTTATATTCCACATGATTCAGGTGGTGGTCGTCTTGGGATATACAGTGACATAGTACAAAACTCAACTAACATTGTTGCAGTTGAATTTGACACTTTTGTCAATGATTTTGATCCAAAAATTTACCATGTGGGGATCAACAATAACTCTGTGGAGTCCCTCAGTTACACCGGGTTTGATATTGACAGAAACATAGGGAATTTGGGGCATGCGTTGATAACTTACAATGCCTCGGCCAAATTCCTTGGAACTAGTTCTGGTTTTATGCCTAACACTTCTGTTTCACACCAGATTGACCTTGGGGAACTTCTACCTGAATGGGTCACTGTTGGGTTTTCTGGTGCAACCGGATTGTCCAATGAGAAAAATGTTATTCATTCCTGGGAATTCATGTCAACTATGAATTCCACGCATTTAGAGGTAAACAAAGAAAACATTGAAATCGTAGTTAAATACAATAGTCGTTGCAATTACTTGTTCTATTCTTTTGTTCTCGTGGTATTTGGTGTTTCTTGGTTGATCATCTCCAAGAAAAGAAAAAGTGATGGTTGTTTTGATTTGGATAAAGTGTCCATGCCGAGAAGATTTGGTTATAAGGAATTAGTTGCAGCAACGAACGGATTTGCAGATGATAGAAAGCTCGGAGAGGGTGGCAGTGGACAAGTTTACAAAGATTCTGAGAGTATGTTCACGAACGAGGTGAAGATTATAAGCCGTCTTATTCATAGAAACCTTGTGCAATTCATGGGGTGGTGGAGGAGCAAGGGAGTTGTTATTGGTTTTGAGTACATGACTAATGGAAGTCTTGACACTCATCTCTTTGGCAGAAGAAGAACTTTGGAATGGGGTGTGAGGTACAAGATAGCGTTAGGTGTGGCTAAAGCGCTTCAATATCTTCATGAAGACGCGGAGCAATGTATTATTCATAGGATATTAAGTAATGTTTTGTTAGACACAGATTTCAATACTAAGGTTAGTGACTTTGGAATGGCAAAGTTGGTGGATCCAAGAATGAGGACTCAGAAGACAAAGGTAGTGGGGACTTATGGGTACCTTGCTCCAGAATATATAAACACAGGAAGGGCTAACAAGGAATCTGACATGTATGGTTTTGGGGTAGTGGCTTTGGAAATAGCATGTGGAAGGAAGACTTACAAGGATGGGGAACATAATTATGTGCCCTTGCCAAATTGGGTGCTGAAATGTTATGTTGATGGCAGTATTTTAGATGCTGCTGATCAGGGATTGAATGGAGATTTTGATGAGAATGAAATGGCGTGTTTGCTCACTGTGGAATATGTTCAATCCCTTTCCTTCAACATAACCAACTTTAACGACCCTGAAAGTGCAAGCATCATTGGATATGTAGGTGTAGCCAAGACTGAGAATGGAACCATGCTTCTAAACCCACCCATCAACAATGGAGTTGGACGAGCCATCTATGGCCAACCTCTACACTTCAAAACACTTCTAATGGACACGTCACAGATTTCTCTACTCGTTTTTCATTCACTATCGATAAGCAACTACGGTGATGGCTTCGCCTTTTACGTGGCACCCCTTGCTTATATTCCACATGATTCAGGTGGTGGTCGTCTTGGGATATACAGTGACATAGTACAAAACTCAACTAACATTGTTGCAGTTGAATTTGACACTTTTGTCAATGATTTTGATCCAAAAATTTACCATGTGGGGATCAACAATAACTCTGTGGAGTCCCTCAGTTACACCGGGTTTGATATTGACAGAAACATAGGGAATTTGGGGCATGCGTTGATAACTTACAATGCCTCGGCCAAATTCCTTGTTGTCTCGTGGTTCTTTGAGGGAACTAGTTCTGGTTTTATGCCTAACACTTCTGTTTCACACCAGATTGACCTTGGGGAACTTCTACCTGAATGGGTCACTGTTGGGTTTTCTGGTGCAACCGGATTGTCCAATGAGAAAAATGTTATTCATTCCTGGGAATTCATGTCAACTATGAATTCCACGCATTTAGAGGTAAACAAAGAAAACATTGAAATCGTAGTTAAATACAAGTTTCAAGTCAAAGTAGTAGTCGTTGCAATTACTTGTTCTATTCTTTTTGTTCTCGTGGTATTTGGTGTTTCTTGGTTGATCATCTCCAAGAAAAGAAAAAGTGATGGTTGTTTTGATTTGGATAAAGTGTCCATGCCGAGAAGATTTGGTTATAAGGAATTAGTTGCAGCAACGAACGGATTTGCAGATGATAGAAAGCTCGGAGAGGGTGGCAGTGGACAAGTTTACAAAGGTTTTTTGAGTGATTTAGGGCGTGTGGTTGCGGTTAAAAGGATTTTTTCTGATGTTGAAGATTCTGAGAGTATGTTCACGAACGAGGTGAAGATTATAAGCCGTCTTATTCATAGAAACCTTGTGCAATTCATGGGGTGGTGTGAGGAGCAAGGGGAGTTGTTATTGGTCTTTGAGTACATGACTAATGACACAGATTTCAATACTAAGGTTAGTGACTTTGGAATGGCAAAGTTGGTGGATCCAAGAATGAGGACTCAGAAGACAAAGGTGGTGGGAACTTATGGTTACCTAGCTCCAGAATATGTAAAGGAAGGAAGGGCTAGCAAAGAATCAGACATTTACAGCTTTGGGGTTGTGGCTTTGGAAATAGCATGTGGAAGAAGGACTTACATGGATGGGGAATATAATCTTGTGCCTTTACGGAATTGGGTGTGGAAACATTATGTGGATGGGAATATTTTCAACGTTGTTGATGAGGTGTTGAAAATGGACTTTGATGAGAATGAAATGATGTGTTTACTCACTGTGGGACTATGGTGTACCCTCCAAGAC 5997 0.4155 STHLEIFLLFPILILPIVQSLSFNITKFNDTESASIIGYAGVAKTENGTMLLNPLISYGVGRAIYGQPLRFKNSSNGHVTDFSTLFSFTIDVSTTTNYADGFAFYVAPLAYQIPPNSDGASFGLYESTPQSNIVAVEFDTFPNVNFDPPVQHVGINNNSLVSLAYAMFDIGSNIGNMGHVLITYNASAKLLAASWFFEGTSSGFMPNTSVSHQIDLGEILPEWVTIGFSGGTGLSIEKNVIHSWAFSSTLDLNSTHQEMNKENDDIITKDKFQFQVKVVVVAVICSILVMLVVISITWLIISKKRKSDGCFDLDKVSMPRRFGYKELVAATNGFADDRKLGEGGSGQVYKGFLSDLGRVVAVKRIFSDVEDSESMFTNEVKIISRLIHRNLVQFIGWCEEQGELLLVFEYMTNGSLDTHLFGRRRTLGWGVRYKIALGVAKALQYLHEDAEQCIIHRDIKSGNVLLDTDFNTKVSDFGMAKLVDPRMRTQKTKVVGTYGYLAPEYINTGRANKESDMYGFGVVALEIACGRKTYKDGEHNYVPLPNWVLKCYVDGSILDAADQGLHGDFDENEMACLLTVGIWCTLHDHKKRPKAEQSPSVDYKRADQLPGRPLIVSENSLHGNNPSQITQNPFVNLSRATSSKLCFICKPFGGCNKFFVFKSSRYSSPMHVKSTFSIIITITPTPSLLHDYYPSCNIGCHSHQNRWTSHCNNQHNHAQPFSFLRCTIIRVVILRSSGRIQRPRHKEGDVGSSVGYESVTFLSEIFINIKLGNINRFERVIVYANVLHGRVNIGTDICIKLNSEKAIFGKVAIGRTVGKAKSATCSVWRNLKAMRGNIKHETVSEKRVEKSVTTPEDESQRRIGCPYKALPTRKRTLTMLSSIEPLLFTLPSPWYAMFFALSRSLKFVMLKFSDSAFLREDGKANMRRKIVITIFGNLNACFSLPLFDRAKKFIPKERAKNSREIQSLSFNITNFNDPESASIIGYVGVAKTENGTMLLNPPINNGVGRAIYGQPLHFKNTSNGHVTDFSTRFSFTIDVSDRSNYGDGFAFYVAPLAYIPHDSGGGRLGIYSDIVQNSTNIVAVEFDTFVNDFDPKIYHVGINNNSVESLSYTGFDIDRNIGNLGHALITYNASAKFLGTSSGFMPNTSVSHQIDLGELLPEWVTVGFSGATGLSNEKNVIHSWEFMSTMNSTHLEVNKENIEIVVKYNSRCNYLFYSFVLVVFGVSWLIISKKRKSDGCFDLDKVSMPRRFGYKELVAATNGFADDRKLGEGGSGQVYKDSESMFTNEVKIISRLIHRNLVQFMGWWRSKGVVIGFEYMTNGSLDTHLFGRRRTLEWGVRYKIALGVAKALQYLHEDAEQCIIHRILSNVLLDTDFNTKVSDFGMAKLVDPRMRTQKTKVVGTYGYLAPEYINTGRANKESDMYGFGVVALEIACGRKTYKDGEHNYVPLPNWVLKCYVDGSILDAADQGLNGDFDENEMACLLTVEYVQSLSFNITNFNDPESASIIGYVGVAKTENGTMLLNPPINNGVGRAIYGQPLHFKTLLMDTSQISLLVFHSLSISNYGDGFAFYVAPLAYIPHDSGGGRLGIYSDIVQNSTNIVAVEFDTFVNDFDPKIYHVGINNNSVESLSYTGFDIDRNIGNLGHALITYNASAKFLVVSWFFEGTSSGFMPNTSVSHQIDLGELLPEWVTVGFSGATGLSNEKNVIHSWEFMSTMNSTHLEVNKENIEIVVKYKFQVKVVVVAITCSILFVLVVFGVSWLIISKKRKSDGCFDLDKVSMPRRFGYKELVAATNGFADDRKLGEGGSGQVYKGFLSDLGRVVAVKRIFSDVEDSESMFTNEVKIISRLIHRNLVQFMGWCEEQGELLLVFEYMTNDTDFNTKVSDFGMAKLVDPRMRTQKTKVVGTYGYLAPEYVKEGRASKESDIYSFGVVALEIACGRRTYMDGEYNLVPLRNWVWKHYVDGNIFNVVDEVLKMDFDENEMMCLLTVGLWCTLQD 1999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00476 1999 SUPERFAMILY Concanavalin A-like lectins/glucanases 966 1196 IPR013320 -
Pste8g00476 1999 CDD lectin_legume_LecRK_Arcelin_ConA 21 250 IPR001220 GO:0030246
Pste8g00476 1999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Pste8g00476 1999 PANTHER - 45 597 - -
Pste8g00476 1999 CDD lectin_legume_LecRK_Arcelin_ConA 1493 1718 IPR001220 GO:0030246
Pste8g00476 1999 Pfam Protein kinase domain 1282 1445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 Pfam Protein kinase domain 1881 1946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 Pfam Protein kinase domain 1799 1879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 Pfam Protein kinase domain 335 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 SUPERFAMILY Protein kinase-like (PK-like) 1781 1998 IPR011009 -
Pste8g00476 1999 FunFam L-type lectin-domain containing receptor kinase IX.1 19 264 - -
Pste8g00476 1999 FunFam L-type lectin-domain containing receptor kinase IX.1 1783 1874 - -
Pste8g00476 1999 SUPERFAMILY Protein kinase-like (PK-like) 1244 1483 IPR011009 -
Pste8g00476 1999 ProSiteProfiles Protein kinase domain profile. 1216 1490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 ProSiteProfiles Protein kinase domain profile. 1798 1999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 Gene3D Phosphorylase Kinase; domain 1 1282 1323 - -
Pste8g00476 1999 Gene3D - 1493 1733 - -
Pste8g00476 1999 Gene3D - 965 1205 - -
Pste8g00476 1999 ProSitePatterns Legume lectins alpha-chain signature. 220 229 IPR000985 -
Pste8g00476 1999 SUPERFAMILY Concanavalin A-like lectins/glucanases 1490 1725 IPR013320 -
Pste8g00476 1999 Gene3D Phosphorylase Kinase; domain 1 1771 1874 - -
Pste8g00476 1999 Gene3D Phosphorylase Kinase; domain 1 1241 1281 - -
Pste8g00476 1999 Gene3D Phosphorylase Kinase; domain 1 307 410 - -
Pste8g00476 1999 Gene3D Transferase(Phosphotransferase) domain 1 411 604 - -
Pste8g00476 1999 Gene3D Transferase(Phosphotransferase) domain 1 1324 1492 - -
Pste8g00476 1999 FunFam Lectin-domain containing receptor kinase A4.3 1874 1999 - -
Pste8g00476 1999 ProSiteProfiles Protein kinase domain profile. 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 CDD lectin_legume_LecRK_Arcelin_ConA 968 1190 IPR001220 GO:0030246
Pste8g00476 1999 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 255 IPR013320 -
Pste8g00476 1999 Gene3D Transferase(Phosphotransferase) domain 1 1877 1979 - -
Pste8g00476 1999 FunFam L-type lectin-domain containing receptor kinase IX.1 319 410 - -
Pste8g00476 1999 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Pste8g00476 1999 ProSitePatterns Legume lectins alpha-chain signature. 1160 1169 IPR000985 -
Pste8g00476 1999 ProSitePatterns Legume lectins beta-chain signature. 1082 1088 IPR019825 -
Pste8g00476 1999 Gene3D - 18 274 - -
Pste8g00476 1999 SUPERFAMILY Protein kinase-like (PK-like) 317 600 IPR011009 -
Pste8g00476 1999 ProSitePatterns Protein kinases ATP-binding region signature. 1804 1827 IPR017441 GO:0005524
Pste8g00476 1999 FunFam Lectin-domain containing receptor kinase A4.3 1320 1495 - -
Pste8g00476 1999 ProSitePatterns Legume lectins beta-chain signature. 1603 1609 IPR019825 -
Pste8g00476 1999 Pfam Legume lectin domain 1492 1725 IPR001220 GO:0030246
Pste8g00476 1999 Pfam Legume lectin domain 20 257 IPR001220 GO:0030246
Pste8g00476 1999 Pfam Legume lectin domain 967 1197 IPR001220 GO:0030246
Pste8g00476 1999 ProSitePatterns Legume lectins beta-chain signature. 134 140 IPR019825 -
Pste8g00476 1999 ProSitePatterns Legume lectins alpha-chain signature. 1688 1697 IPR000985 -
Pste8g00476 1999 FunFam L-type lectin-domain containing receptor kinase IX.1 411 611 - -
Pste8g00476 1999 SMART serkin_6 334 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 SMART serkin_6 1264 1528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00476 1999 SMART serkin_6 1798 1986 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00476 Pste-Chr8 2498156 2518727 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00476 6 601 Receptor kinase-like Gene Family AT5G10530 43.871 5.89e-150 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00476 Lectin_legB 4.1e-43 CL0004