Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00472 GATGATGTGGAGGCTGAAATGAGAAGACTAAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAAGAGGAGATTGGAGGAGGCAAGGCTTGCCGAAGAAGCTGCGTTGGCGATGGCAGAAAAGGAGAAGGCAAGATCAAAAGCAGCCATTGAGACTGCTGAGGCACAGAAGAGGATTGCAGAACTGGAATCACAAAAGAGAATCAGTGCAGAATTGAAAGCATATAGAGAAACAGAAGAGAAAAGAAGAGCAATGGATGCTTTATCTCACAATCATGTGAGATATAGAAGGTACACAATTGAGGAGATTGAAGATGCAACAAAATTTTTTTCTGAGTCACAGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTTTAAGTGCCATCTGGATCACACACCTGTGGCAGTGAAGGTTCTTCGTCCTGATGCTGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTATTGAGTTGCATTAGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGCCCTGAGTATGGCTGCCTTGTGTATGAGTACATGGCAAATGGAAGCTTAGATGACCGCCTCTTCTGCCGAGGAAACACTCCCCCAATTCCATGGCAGCTCAGGTTCAAAATTGCAGCTGAAATTGGCACAGGTTTGTTGTTCCTCCACCAGACCAAACCTGAGCCTCTTGTGCATAGAGACCTCAAACCAGGCAACATCTTGCTGGACAGAAACTATGTGTCCAAGATCAGTGATGTAGGTTTGGCTAGGCTGGTTCCACCCTCAGTGGCAGACACTGTGACACAGTATAGGATGACATCTGCAGCTGGAACTTTCTGTTACATAGATCCTGAGTACCAGCAGACAGGAATGCTGGGAGTGAAATCTGATATATACTCTCTTGGGATCATTTTCTTGCAAATTTTGACAGCAAGACCACCAATGGGTTTGACTCACCATGTTACTAGAGCCATTGAGAAGGGCTTATTTCAGGAGATGTTGGATCCAAAAGTACCTGACTGGCCAATAGAGGATGCCATGAAATTGGCAAATATTGGTATCAAGTGTGCTGAACTGAGGAGGAGAGACAGACCTGATCTTGGCAAGGAAGTGCTGCCTGAACTAGACAAGCTGAGAGACCTTGCTGAAAGCTATGATCACTATTCAGTGTATGGTGGCTATATAAGCCCATCCAATCAGAGCCAAGTTTCTCTTCAGCTG 1215 0.4543 DDVEAEMRRLKLELKQTMEMYKRRLEEARLAEEAALAMAEKEKARSKAAIETAEAQKRIAELESQKRISAELKAYRETEEKRRAMDALSHNHVRYRRYTIEEIEDATKFFSESQKIGEGGYGPVFKCHLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFCRGNTPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVTRAIEKGLFQEMLDPKVPDWPIEDAMKLANIGIKCAELRRRDRPDLGKEVLPELDKLRDLAESYDHYSVYGGYISPSNQSQVSLQL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00472 405 Coils Coil 11 65 - -
Pste8g00472 405 ProSiteProfiles Protein kinase domain profile. 110 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00472 405 FunFam U-box domain-containing protein 51 183 383 - -
Pste8g00472 405 Pfam Protein kinase domain 111 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00472 405 SMART serkin_6 110 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00472 405 PANTHER OS02G0152300 PROTEIN 3 388 - -
Pste8g00472 405 SUPERFAMILY Protein kinase-like (PK-like) 90 365 IPR011009 -
Pste8g00472 405 Gene3D Transferase(Phosphotransferase) domain 1 183 388 - -
Pste8g00472 405 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 82 182 - -
Pste8g00472 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Pste8g00472 405 Gene3D Phosphorylase Kinase; domain 1 77 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00472 Pste-Chr8 2492146 2494398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00472 1 403 Receptor kinase-like Gene Family AT1G78940 66.589 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste8g00472 Pkinase 6.7e-40 CL0016