Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00466 ATGAATGACAAAAATCCAAAGCCACCACCAGACACACCTGACAGTGATGATTTCACCGACCAGTGGCCCTTTCAGCTCTCTGATTACTTGAAATTTGATGATAATCAATGGATGAATGATGATTTTGAGCCATTTGCTTCTCAGAATGTCTCAAACCAGGTTCATCAAGCCAGTAATGTAGGTCAGTTTGGAGGAGGAAGCAGCCACTTTGAAGGGTCTTCTAGCAGAGATACTGGCAGTGAACATGAGAGGAGGCAAGTTGTTAGAGCGAGAGTTGCATTCAAAACAATGTCAGAGATTGAAGTACTTGAGGATGGGTACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAGCCCCAATCCAAGGAATTACTATAGGTGTTCAGTGGATGGATGCAATGTGAAAAAGAGAATAGAGAGAGACAGGGATGATCCAAGGTATGTAATAACGAGCTACGAAGGCAACCACACTCATCCAAGTTCTTCCTAGGTCGAATATGAAGTTTTGGCAGTGTATATAAGTTTTGTTGACCATAGCTACTAGTACTATCTCATTAATACTGCAAGTGCTCTTGCCAAAACTGCTCTTGTAGAGTAGACCTTCGAGGAAATATATGGAATTAAAATGTGCTTTTTGACAGCTACCAACTTACCATATTATTTAATCAAGA 676 0.4083 MNDKNPKPPPDTPDSDDFTDQWPFQLSDYLKFDDNQWMNDDFEPFASQNVSNQVHQASNVGQFGGGSSHFEGSSSRDTGSEHERRQVVRARVAFKTMSEIEVLEDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCNVKKRIERDRDDPRYVITSYEGNHTHPSSS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00466 164 MobiDBLite consensus disorder prediction 1 21 - -
Pste8g00466 164 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 162 IPR044810 GO:0003700
Pste8g00466 164 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00466 164 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00466 164 MobiDBLite consensus disorder prediction 145 164 - -
Pste8g00466 164 MobiDBLite consensus disorder prediction 51 74 - -
Pste8g00466 164 Gene3D WRKY domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00466 164 FunFam WRKY transcription factor 57 89 163 - -
Pste8g00466 164 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00466 164 MobiDBLite consensus disorder prediction 51 84 - -
Pste8g00466 164 SUPERFAMILY WRKY DNA-binding domain 95 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00466 Pste-Chr8 2478951 2480141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00466 35 162 WRKY Transcription Factor Family AT5G26170 51.049 9.64e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g00466 WRKY 2.9e-24 CL0274