Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00463 GCATTCTTATCCTCTCAATTTCAAATGCCTATTACAAACACTTCTCCAACTCTGACCAACTGGTTTTCAAGAATGATGGAAACAGTAACAATGTGTAAGCAACTTTACATTGGTGGTTCTGTAGTAAGGCTATTCATGAAAGCTACGGAGAAACTTCTTTTTGCTGTATTCACTTGCGCTCTGGCGCTAGGAGGGTCAATAGTAGGAACAATTGCAGGAGGCATCAAAGGGCAGACCACAGAAGCTGGTTTTCTTGATGGGGCTGGCAAAGGAGCAATTACAGGAGCCATTGCAGCATTGGAATTGATAAATTTTGAGGCTGTTGATGGGCCATTGTCCAGGGTTGCCCTGTTGAGCAGTTTATTAAATGGGAAAGTCTTTATGGAATGGATATGTCCAGCTGTTGCAAAACTCTATCAACTGCATGCAACTATGAACACTCTGGAAACAATCTACCAAGAAGTATCGGACATTTATGATATCAGGGGAGGCAGAGGGATACCCCATAATGTAATTATGAAGCTTCCTTTTCAGCCATTCAACTCTATCAAAATGTTGAAATTATACAACATGTCTTGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGGAGAATTGGTGAGGATACTTCCAAAATGTAGCCACCATTTTCACTTAGAATGCATAGACAAGTGGCTAGTACAACAAGGATCATGCCCAATGTGCAGAACTTATGTTCCAGATCTCATTCGCACATGTTAGCGTTTTTTGTTTTAAAGTGGGTTGGGCATCTTAATGACAAAAGAAAAGGTAGGTTGAGCTTCTGTCATGTATTAAACTTGTATATAGTCTATTAAAGTAATTGCTAAATTAGTGCATGTTCATTTTACTTATTTTATTTTATTTTTACAATTTTATAGTATATTAATTAGAGAACATGAAAACCCACGAATTAAGAAAAAAAGTTACCAAG 952 0.3792 MPITNTSPTLTNWFSRMMETVTMCKQLYIGGSVVRLFMKATEKLLFAVFTCALALGGSIVGTIAGGIKGQTTEAGFLDGAGKGAITGAIAALELINFEAVDGPLSRVALLSSLLNGKVFMEWICPAVAKLYQLHATMNTLETIYQEVSDIYDIRGGRGIPHNVIMKLPFQPFNSIKMLKLYNMSCCSICFQDFEDGELVRILPKCSHHFHLECIDKWLVQQGSCPMCRTYVPDLIRTC 238
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00463 238 SMART ring_2 186 227 IPR001841 -
Pste8g00463 238 ProSiteProfiles Zinc finger RING-type profile. 186 228 IPR001841 -
Pste8g00463 238 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 37 229 IPR044523 -
Pste8g00463 238 CDD RING-H2_EL5-like 185 228 - -
Pste8g00463 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 234 IPR013083 -
Pste8g00463 238 SUPERFAMILY RING/U-box 185 233 - -
Pste8g00463 238 Pfam Ring finger domain 186 228 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste8g00463 Pste-Chr8 2454808 2457245 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00463 43 231 C3H Transcription Factor Family AT5G66070 34.848 1.77e-37 129